Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC21.27■■□□□ 1
CDC42BPAQ5VT25 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDC42BPAQ5VT25 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDC42BPAQ5VT25 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC21.27■■□□□ 1
CDC42BPAQ5VT25 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDC42BPAQ5VT25 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC21.27■■□□□ 1
CDC42BPAQ5VT25 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CDC42BPAQ5VT25 SIRPB3P-201ENST00000340424 1216 ntBASIC21.27■■□□□ 1
CDC42BPAQ5VT25 AL357373.1-201ENST00000394974 322 ntBASIC21.27■■□□□ 1
CDC42BPAQ5VT25 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CDC42BPAQ5VT25 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDC42BPAQ5VT25 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDC42BPAQ5VT25 AC079250.1-201ENST00000456046 531 ntBASIC21.27■■□□□ 1
CDC42BPAQ5VT25 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC21.27■■□□□ 1
CDC42BPAQ5VT25 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDC42BPAQ5VT25 AC005777.1-201ENST00000588332 187 ntBASIC21.27■■□□□ 1
CDC42BPAQ5VT25 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDC42BPAQ5VT25 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
CDC42BPAQ5VT25 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC21.27■■□□□ 1
CDC42BPAQ5VT25 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDC42BPAQ5VT25 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CDC42BPAQ5VT25 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
CDC42BPAQ5VT25 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
CDC42BPAQ5VT25 AL590824.1-201ENST00000403828 1349 ntBASIC21.27■□□□□ 0.99
CDC42BPAQ5VT25 ADK-205ENST00000539909 1866 ntTSL 2 BASIC21.27■□□□□ 0.99
CDC42BPAQ5VT25 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 AL157823.1-201ENST00000403727 628 ntBASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 BX322534.1-201ENST00000635574 241 ntBASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 AC215524.1-201ENST00000635696 241 ntBASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 AC012617.1-204ENST00000586340 2305 ntBASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 CICP24-201ENST00000605464 2705 ntBASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 SOD2-205ENST00000444946 917 ntTSL 2 BASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 SALL4P6-201ENST00000429385 1691 ntBASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDC42BPAQ5VT25 HYMAI-201ENST00000635591 3347 ntBASIC21.25■□□□□ 0.99
CDC42BPAQ5VT25 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CDC42BPAQ5VT25 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDC42BPAQ5VT25 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDC42BPAQ5VT25 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CDC42BPAQ5VT25 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDC42BPAQ5VT25 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDC42BPAQ5VT25 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDC42BPAQ5VT25 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC21.25■□□□□ 0.99
CDC42BPAQ5VT25 NQO2-204ENST00000380454 851 ntTSL 2 BASIC21.25■□□□□ 0.99
CDC42BPAQ5VT25 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CDC42BPAQ5VT25 HNRNPA1P58-201ENST00000403629 610 ntBASIC21.25■□□□□ 0.99
CDC42BPAQ5VT25 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDC42BPAQ5VT25 AL590235.1-201ENST00000564650 861 ntBASIC21.25■□□□□ 0.99
CDC42BPAQ5VT25 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
CDC42BPAQ5VT25 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC21.25■□□□□ 0.99
CDC42BPAQ5VT25 BAP1-211ENST00000615113 489 ntBASIC21.25■□□□□ 0.99
CDC42BPAQ5VT25 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC21.25■□□□□ 0.99
CDC42BPAQ5VT25 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CDC42BPAQ5VT25 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDC42BPAQ5VT25 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDC42BPAQ5VT25 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDC42BPAQ5VT25 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDC42BPAQ5VT25 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDC42BPAQ5VT25 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDC42BPAQ5VT25 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDC42BPAQ5VT25 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
CDC42BPAQ5VT25 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDC42BPAQ5VT25 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDC42BPAQ5VT25 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms