Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ALFQ53S48 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ALFQ53S48 RN7SL832P-201ENST00000607781 1756 ntBASIC14.99□□□□□ -0.01
ALFQ53S48 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ALFQ53S48 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
ALFQ53S48 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
ALFQ53S48 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ALFQ53S48 AC016700.1-201ENST00000429424 312 ntBASIC14.99□□□□□ -0.01
ALFQ53S48 AC106794.1-201ENST00000506935 792 ntBASIC14.99□□□□□ -0.01
ALFQ53S48 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
ALFQ53S48 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.99□□□□□ -0.01
ALFQ53S48 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
ALFQ53S48 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.99□□□□□ -0.01
ALFQ53S48 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.99□□□□□ -0.01
ALFQ53S48 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.99□□□□□ -0.01
ALFQ53S48 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.99□□□□□ -0.01
ALFQ53S48 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ALFQ53S48 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.99□□□□□ -0.01
ALFQ53S48 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ALFQ53S48 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
ALFQ53S48 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
ALFQ53S48 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ALFQ53S48 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
ALFQ53S48 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
ALFQ53S48 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ALFQ53S48 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
ALFQ53S48 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ALFQ53S48 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ALFQ53S48 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ALFQ53S48 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ALFQ53S48 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.98□□□□□ -0.01
ALFQ53S48 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ALFQ53S48 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
ALFQ53S48 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ALFQ53S48 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.98□□□□□ -0.01
ALFQ53S48 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ALFQ53S48 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ALFQ53S48 MYO15B-237ENST00000642007 4893 ntBASIC14.98□□□□□ -0.01
ALFQ53S48 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ALFQ53S48 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.98□□□□□ -0.01
ALFQ53S48 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
ALFQ53S48 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ALFQ53S48 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.98□□□□□ -0.01
ALFQ53S48 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.98□□□□□ -0.01
ALFQ53S48 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.98□□□□□ -0.01
ALFQ53S48 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.98□□□□□ -0.01
ALFQ53S48 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.98□□□□□ -0.01
ALFQ53S48 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.98□□□□□ -0.01
ALFQ53S48 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ALFQ53S48 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.98□□□□□ -0.01
ALFQ53S48 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.98□□□□□ -0.01
ALFQ53S48 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.98□□□□□ -0.01
ALFQ53S48 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.98□□□□□ -0.01
ALFQ53S48 AC133540.1-201ENST00000620845 1019 ntBASIC14.98□□□□□ -0.01
ALFQ53S48 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.98□□□□□ -0.01
ALFQ53S48 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
ALFQ53S48 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ALFQ53S48 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ALFQ53S48 AC007191.1-201ENST00000623179 2995 ntBASIC14.98□□□□□ -0.01
ALFQ53S48 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ALFQ53S48 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
ALFQ53S48 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ALFQ53S48 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ALFQ53S48 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ALFQ53S48 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ALFQ53S48 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ALFQ53S48 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ALFQ53S48 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ALFQ53S48 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ALFQ53S48 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ALFQ53S48 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ALFQ53S48 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.97□□□□□ -0.01
ALFQ53S48 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ALFQ53S48 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
ALFQ53S48 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ALFQ53S48 AC090505.1-201ENST00000430515 1834 ntBASIC14.97□□□□□ -0.01
ALFQ53S48 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.97□□□□□ -0.01
ALFQ53S48 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ALFQ53S48 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ALFQ53S48 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
ALFQ53S48 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ALFQ53S48 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.97□□□□□ -0.01
ALFQ53S48 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ALFQ53S48 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ALFQ53S48 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
ALFQ53S48 KRT18P36-201ENST00000411618 1276 ntBASIC14.97□□□□□ -0.01
ALFQ53S48 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.97□□□□□ -0.01
ALFQ53S48 FNTAP2-201ENST00000430308 634 ntBASIC14.97□□□□□ -0.01
ALFQ53S48 EIF4HP1-201ENST00000453115 687 ntBASIC14.97□□□□□ -0.01
ALFQ53S48 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.97□□□□□ -0.01
ALFQ53S48 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.97□□□□□ -0.01
ALFQ53S48 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ALFQ53S48 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.97□□□□□ -0.01
ALFQ53S48 MIR6074-201ENST00000612054 107 ntBASIC14.97□□□□□ -0.01
ALFQ53S48 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.97□□□□□ -0.01
ALFQ53S48 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ALFQ53S48 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ALFQ53S48 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ALFQ53S48 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.97□□□□□ -0.01
ALFQ53S48 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms