Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2B3Q16720 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
ATP2B3Q16720 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2B3Q16720 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC17.84■□□□□ 0.45
ATP2B3Q16720 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
ATP2B3Q16720 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2B3Q16720 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2B3Q16720 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2B3Q16720 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2B3Q16720 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
ATP2B3Q16720 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2B3Q16720 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC17.84■□□□□ 0.45
ATP2B3Q16720 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC17.84■□□□□ 0.45
ATP2B3Q16720 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2B3Q16720 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC17.84■□□□□ 0.45
ATP2B3Q16720 RN7SL769P-201ENST00000469386 295 ntBASIC17.84■□□□□ 0.45
ATP2B3Q16720 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC17.84■□□□□ 0.45
ATP2B3Q16720 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC17.84■□□□□ 0.45
ATP2B3Q16720 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC17.84■□□□□ 0.45
ATP2B3Q16720 AC124068.2-201ENST00000569473 1109 ntBASIC17.84■□□□□ 0.45
ATP2B3Q16720 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
ATP2B3Q16720 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC17.84■□□□□ 0.45
ATP2B3Q16720 AC020922.3-201ENST00000595064 547 ntBASIC17.84■□□□□ 0.45
ATP2B3Q16720 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC17.84■□□□□ 0.45
ATP2B3Q16720 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2B3Q16720 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
ATP2B3Q16720 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
ATP2B3Q16720 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
ATP2B3Q16720 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2B3Q16720 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC17.84■□□□□ 0.45
ATP2B3Q16720 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC17.84■□□□□ 0.45
ATP2B3Q16720 AC215219.1-201ENST00000400706 1817 ntBASIC17.84■□□□□ 0.45
ATP2B3Q16720 STK26-204ENST00000481105 1835 ntTSL 2 BASIC17.84■□□□□ 0.45
ATP2B3Q16720 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2B3Q16720 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2B3Q16720 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC17.84■□□□□ 0.45
ATP2B3Q16720 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
ATP2B3Q16720 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC17.83■□□□□ 0.45
ATP2B3Q16720 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.83■□□□□ 0.45
ATP2B3Q16720 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
ATP2B3Q16720 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
ATP2B3Q16720 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC17.83■□□□□ 0.45
ATP2B3Q16720 AC005912.2-201ENST00000619492 2400 ntBASIC17.83■□□□□ 0.45
ATP2B3Q16720 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
ATP2B3Q16720 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
ATP2B3Q16720 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
ATP2B3Q16720 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ATP2B3Q16720 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
ATP2B3Q16720 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
ATP2B3Q16720 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
ATP2B3Q16720 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ATP2B3Q16720 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
ATP2B3Q16720 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC17.83■□□□□ 0.45
ATP2B3Q16720 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC17.83■□□□□ 0.45
ATP2B3Q16720 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC17.83■□□□□ 0.45
ATP2B3Q16720 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
ATP2B3Q16720 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2B3Q16720 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2B3Q16720 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2B3Q16720 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2B3Q16720 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC17.83■□□□□ 0.44
ATP2B3Q16720 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2B3Q16720 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2B3Q16720 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2B3Q16720 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2B3Q16720 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC17.83■□□□□ 0.44
ATP2B3Q16720 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC17.83■□□□□ 0.44
ATP2B3Q16720 SUPT4H1P2-201ENST00000501248 353 ntBASIC17.83■□□□□ 0.44
ATP2B3Q16720 RNA5SP423-201ENST00000517127 109 ntBASIC17.83■□□□□ 0.44
ATP2B3Q16720 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2B3Q16720 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC17.83■□□□□ 0.44
ATP2B3Q16720 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2B3Q16720 SORD2P-201ENST00000558556 1069 ntBASIC17.83■□□□□ 0.44
ATP2B3Q16720 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC17.83■□□□□ 0.44
ATP2B3Q16720 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC17.83■□□□□ 0.44
ATP2B3Q16720 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC17.83■□□□□ 0.44
ATP2B3Q16720 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2B3Q16720 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC17.83■□□□□ 0.44
ATP2B3Q16720 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.83■□□□□ 0.44
ATP2B3Q16720 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC17.83■□□□□ 0.44
ATP2B3Q16720 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2B3Q16720 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
ATP2B3Q16720 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC17.83■□□□□ 0.44
ATP2B3Q16720 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2B3Q16720 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2B3Q16720 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2B3Q16720 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2B3Q16720 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
ATP2B3Q16720 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2B3Q16720 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2B3Q16720 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2B3Q16720 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
ATP2B3Q16720 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC17.82■□□□□ 0.44
ATP2B3Q16720 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC17.82■□□□□ 0.44
ATP2B3Q16720 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2B3Q16720 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2B3Q16720 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
ATP2B3Q16720 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2B3Q16720 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
ATP2B3Q16720 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms