Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD47Q08722 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD47Q08722 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC13.63□□□□□ -0.23
CD47Q08722 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD47Q08722 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CD47Q08722 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.62□□□□□ -0.23
CD47Q08722 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.62□□□□□ -0.23
CD47Q08722 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD47Q08722 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.62□□□□□ -0.23
CD47Q08722 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD47Q08722 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD47Q08722 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD47Q08722 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD47Q08722 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CD47Q08722 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD47Q08722 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.62□□□□□ -0.23
CD47Q08722 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CD47Q08722 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CD47Q08722 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD47Q08722 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.62□□□□□ -0.23
CD47Q08722 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CD47Q08722 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD47Q08722 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CD47Q08722 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.62□□□□□ -0.23
CD47Q08722 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.62□□□□□ -0.23
CD47Q08722 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD47Q08722 GNAQP1-201ENST00000444815 1067 ntBASIC13.62□□□□□ -0.23
CD47Q08722 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.62□□□□□ -0.23
CD47Q08722 VDAC1P7-201ENST00000462417 847 ntBASIC13.62□□□□□ -0.23
CD47Q08722 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.62□□□□□ -0.23
CD47Q08722 AC104596.2-201ENST00000512793 793 ntBASIC13.62□□□□□ -0.23
CD47Q08722 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.62□□□□□ -0.23
CD47Q08722 AC055876.2-201ENST00000531834 546 ntBASIC13.62□□□□□ -0.23
CD47Q08722 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD47Q08722 AC009118.2-201ENST00000613275 655 ntBASIC13.62□□□□□ -0.23
CD47Q08722 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.62□□□□□ -0.23
CD47Q08722 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD47Q08722 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD47Q08722 AC131212.3-201ENST00000624087 4219 ntBASIC13.62□□□□□ -0.23
CD47Q08722 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
CD47Q08722 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD47Q08722 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD47Q08722 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CD47Q08722 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.62□□□□□ -0.23
CD47Q08722 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CD47Q08722 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.61□□□□□ -0.23
CD47Q08722 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD47Q08722 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CD47Q08722 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD47Q08722 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD47Q08722 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.61□□□□□ -0.23
CD47Q08722 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD47Q08722 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CD47Q08722 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.61□□□□□ -0.23
CD47Q08722 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CD47Q08722 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD47Q08722 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD47Q08722 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD47Q08722 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
CD47Q08722 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CD47Q08722 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CD47Q08722 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD47Q08722 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD47Q08722 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD47Q08722 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD47Q08722 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
CD47Q08722 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CD47Q08722 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CD47Q08722 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD47Q08722 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CD47Q08722 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD47Q08722 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD47Q08722 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.61□□□□□ -0.23
CD47Q08722 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.61□□□□□ -0.23
CD47Q08722 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.61□□□□□ -0.23
CD47Q08722 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.61□□□□□ -0.23
CD47Q08722 AC093004.1-201ENST00000508850 424 ntBASIC13.61□□□□□ -0.23
CD47Q08722 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.61□□□□□ -0.23
CD47Q08722 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.61□□□□□ -0.23
CD47Q08722 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.61□□□□□ -0.23
CD47Q08722 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD47Q08722 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.61□□□□□ -0.23
CD47Q08722 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD47Q08722 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.61□□□□□ -0.23
CD47Q08722 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CD47Q08722 DRD5P1-201ENST00000456605 1438 ntBASIC13.61□□□□□ -0.23
CD47Q08722 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC13.61□□□□□ -0.23
CD47Q08722 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CD47Q08722 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD47Q08722 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD47Q08722 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.61□□□□□ -0.23
CD47Q08722 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD47Q08722 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD47Q08722 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD47Q08722 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.61□□□□□ -0.23
CD47Q08722 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CD47Q08722 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD47Q08722 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD47Q08722 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CD47Q08722 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms