Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 METTL26-214ENST00000614890 801 ntTSL 3 BASIC10.47□□□□□ -0.73
UBE2D3P61077 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC10.47□□□□□ -0.73
UBE2D3P61077 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D3P61077 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D3P61077 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC10.47□□□□□ -0.73
UBE2D3P61077 OS9-218ENST00000551035 2246 ntTSL 2 BASIC10.47□□□□□ -0.73
UBE2D3P61077 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D3P61077 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D3P61077 AL136172.1-201ENST00000598590 1394 ntBASIC10.47□□□□□ -0.73
UBE2D3P61077 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D3P61077 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D3P61077 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D3P61077 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D3P61077 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC10.47□□□□□ -0.73
UBE2D3P61077 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
UBE2D3P61077 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC10.47□□□□□ -0.73
UBE2D3P61077 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D3P61077 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D3P61077 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
UBE2D3P61077 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D3P61077 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D3P61077 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D3P61077 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC10.46□□□□□ -0.73
UBE2D3P61077 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.73
UBE2D3P61077 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
UBE2D3P61077 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC10.46□□□□□ -0.73
UBE2D3P61077 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC10.46□□□□□ -0.73
UBE2D3P61077 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
UBE2D3P61077 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
UBE2D3P61077 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
UBE2D3P61077 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.73
UBE2D3P61077 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
UBE2D3P61077 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
UBE2D3P61077 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC10.46□□□□□ -0.73
UBE2D3P61077 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
UBE2D3P61077 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
UBE2D3P61077 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
UBE2D3P61077 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
UBE2D3P61077 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
UBE2D3P61077 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC10.46□□□□□ -0.73
UBE2D3P61077 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
UBE2D3P61077 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
UBE2D3P61077 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC10.46□□□□□ -0.73
UBE2D3P61077 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC10.46□□□□□ -0.73
UBE2D3P61077 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC10.46□□□□□ -0.73
UBE2D3P61077 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
UBE2D3P61077 NSL1-201ENST00000366976 722 ntTSL 2 BASIC10.46□□□□□ -0.73
UBE2D3P61077 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
UBE2D3P61077 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
UBE2D3P61077 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
UBE2D3P61077 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
UBE2D3P61077 PGGT1BP2-201ENST00000398621 1028 ntBASIC10.46□□□□□ -0.73
UBE2D3P61077 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
UBE2D3P61077 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC10.46□□□□□ -0.73
UBE2D3P61077 GALT-202ENST00000450095 1280 ntTSL 2 BASIC10.46□□□□□ -0.73
UBE2D3P61077 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC10.46□□□□□ -0.73
UBE2D3P61077 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC10.46□□□□□ -0.73
UBE2D3P61077 HNRNPA1P13-201ENST00000510646 963 ntBASIC10.46□□□□□ -0.73
UBE2D3P61077 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
UBE2D3P61077 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC10.46□□□□□ -0.73
UBE2D3P61077 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC10.46□□□□□ -0.73
UBE2D3P61077 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC10.46□□□□□ -0.73
UBE2D3P61077 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC10.46□□□□□ -0.73
UBE2D3P61077 AC005252.2-201ENST00000624630 1141 ntBASIC10.46□□□□□ -0.73
UBE2D3P61077 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC10.46□□□□□ -0.73
UBE2D3P61077 MRPL37P1-201ENST00000592451 1337 ntBASIC10.46□□□□□ -0.73
UBE2D3P61077 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
UBE2D3P61077 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC10.46□□□□□ -0.74
UBE2D3P61077 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC10.46□□□□□ -0.74
UBE2D3P61077 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
UBE2D3P61077 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
UBE2D3P61077 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
UBE2D3P61077 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
UBE2D3P61077 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC10.46□□□□□ -0.74
UBE2D3P61077 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC10.46□□□□□ -0.74
UBE2D3P61077 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC10.46□□□□□ -0.74
UBE2D3P61077 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
UBE2D3P61077 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC10.46□□□□□ -0.74
UBE2D3P61077 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
UBE2D3P61077 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
UBE2D3P61077 MYADML-201ENST00000474610 2147 ntBASIC10.46□□□□□ -0.74
UBE2D3P61077 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
UBE2D3P61077 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
UBE2D3P61077 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
UBE2D3P61077 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC10.46□□□□□ -0.74
UBE2D3P61077 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
UBE2D3P61077 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.74
UBE2D3P61077 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
UBE2D3P61077 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC10.46□□□□□ -0.74
UBE2D3P61077 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
UBE2D3P61077 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
UBE2D3P61077 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC10.46□□□□□ -0.74
UBE2D3P61077 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.74
UBE2D3P61077 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
UBE2D3P61077 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
UBE2D3P61077 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
UBE2D3P61077 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
UBE2D3P61077 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
UBE2D3P61077 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
UBE2D3P61077 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms