Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SUMO3P55854 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SUMO3P55854 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SUMO3P55854 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SUMO3P55854 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
SUMO3P55854 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SUMO3P55854 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.17□□□□□ -0.3
SUMO3P55854 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
SUMO3P55854 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SUMO3P55854 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.17□□□□□ -0.3
SUMO3P55854 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SUMO3P55854 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SUMO3P55854 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SUMO3P55854 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SUMO3P55854 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SUMO3P55854 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SUMO3P55854 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SUMO3P55854 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.17□□□□□ -0.3
SUMO3P55854 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SUMO3P55854 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SUMO3P55854 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SUMO3P55854 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.17□□□□□ -0.3
SUMO3P55854 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.17□□□□□ -0.3
SUMO3P55854 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SUMO3P55854 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SUMO3P55854 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SUMO3P55854 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SUMO3P55854 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.17□□□□□ -0.3
SUMO3P55854 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.17□□□□□ -0.3
SUMO3P55854 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.17□□□□□ -0.3
SUMO3P55854 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
SUMO3P55854 ACTBP11-201ENST00000436287 1126 ntBASIC13.17□□□□□ -0.3
SUMO3P55854 XBP1P1-201ENST00000436573 652 ntBASIC13.17□□□□□ -0.3
SUMO3P55854 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.17□□□□□ -0.3
SUMO3P55854 AC004898.1-201ENST00000451057 766 ntBASIC13.17□□□□□ -0.3
SUMO3P55854 SERPINA13P-202ENST00000478994 924 ntBASIC13.17□□□□□ -0.3
SUMO3P55854 AC005740.2-201ENST00000511085 419 ntBASIC13.17□□□□□ -0.3
SUMO3P55854 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.17□□□□□ -0.3
SUMO3P55854 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.17□□□□□ -0.3
SUMO3P55854 PGAM1P5-201ENST00000548011 764 ntBASIC13.17□□□□□ -0.3
SUMO3P55854 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.17□□□□□ -0.3
SUMO3P55854 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.17□□□□□ -0.3
SUMO3P55854 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.17□□□□□ -0.3
SUMO3P55854 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC13.17□□□□□ -0.3
SUMO3P55854 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.17□□□□□ -0.3
SUMO3P55854 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SUMO3P55854 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SUMO3P55854 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.17□□□□□ -0.3
SUMO3P55854 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.17□□□□□ -0.3
SUMO3P55854 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.17□□□□□ -0.3
SUMO3P55854 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC13.17□□□□□ -0.3
SUMO3P55854 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.17□□□□□ -0.3
SUMO3P55854 AC068587.8-201ENST00000641239 219 ntBASIC13.17□□□□□ -0.3
SUMO3P55854 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SUMO3P55854 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SUMO3P55854 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SUMO3P55854 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SUMO3P55854 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SUMO3P55854 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SUMO3P55854 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SUMO3P55854 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
SUMO3P55854 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
SUMO3P55854 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SUMO3P55854 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
SUMO3P55854 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.17□□□□□ -0.3
SUMO3P55854 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SUMO3P55854 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.17□□□□□ -0.3
SUMO3P55854 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.17□□□□□ -0.3
SUMO3P55854 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SUMO3P55854 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.17□□□□□ -0.3
SUMO3P55854 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.17□□□□□ -0.3
SUMO3P55854 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SUMO3P55854 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SUMO3P55854 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SUMO3P55854 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SUMO3P55854 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SUMO3P55854 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SUMO3P55854 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SUMO3P55854 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SUMO3P55854 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SUMO3P55854 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.16□□□□□ -0.3
SUMO3P55854 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.16□□□□□ -0.3
SUMO3P55854 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SUMO3P55854 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SUMO3P55854 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SUMO3P55854 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.16□□□□□ -0.3
SUMO3P55854 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.16□□□□□ -0.3
SUMO3P55854 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SUMO3P55854 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.16□□□□□ -0.3
SUMO3P55854 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.16□□□□□ -0.3
SUMO3P55854 AC027601.5-201ENST00000624065 2482 ntBASIC13.16□□□□□ -0.3
SUMO3P55854 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SUMO3P55854 AC012617.1-204ENST00000586340 2305 ntBASIC13.16□□□□□ -0.3
SUMO3P55854 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SUMO3P55854 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SUMO3P55854 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SUMO3P55854 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.16□□□□□ -0.3
SUMO3P55854 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SUMO3P55854 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
SUMO3P55854 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms