Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.21■□□□□ 0.03
MMP13P45452 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MMP13P45452 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
MMP13P45452 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MMP13P45452 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MMP13P45452 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MMP13P45452 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MMP13P45452 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.21■□□□□ 0.03
MMP13P45452 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.21■□□□□ 0.03
MMP13P45452 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.21■□□□□ 0.03
MMP13P45452 AC006001.1-201ENST00000325130 474 ntBASIC15.21■□□□□ 0.03
MMP13P45452 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.21■□□□□ 0.03
MMP13P45452 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.21■□□□□ 0.03
MMP13P45452 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.21■□□□□ 0.03
MMP13P45452 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
MMP13P45452 CTBP2P5-201ENST00000454986 1264 ntBASIC15.21■□□□□ 0.03
MMP13P45452 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.21■□□□□ 0.03
MMP13P45452 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.21■□□□□ 0.03
MMP13P45452 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.21■□□□□ 0.03
MMP13P45452 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.21■□□□□ 0.03
MMP13P45452 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.21■□□□□ 0.03
MMP13P45452 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
MMP13P45452 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.21■□□□□ 0.03
MMP13P45452 AC106820.3-201ENST00000561653 397 ntBASIC15.21■□□□□ 0.03
MMP13P45452 OR10B1P-201ENST00000601666 907 ntBASIC15.21■□□□□ 0.03
MMP13P45452 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.21■□□□□ 0.03
MMP13P45452 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MMP13P45452 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.21■□□□□ 0.03
MMP13P45452 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC15.21■□□□□ 0.03
MMP13P45452 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC15.21■□□□□ 0.03
MMP13P45452 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MMP13P45452 FAM90A12P-201ENST00000519497 2375 ntBASIC15.21■□□□□ 0.03
MMP13P45452 FAM90A24P-201ENST00000520792 2369 ntBASIC15.21■□□□□ 0.03
MMP13P45452 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MMP13P45452 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
MMP13P45452 AL365209.1-201ENST00000624418 6473 ntBASIC15.21■□□□□ 0.03
MMP13P45452 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.21■□□□□ 0.02
MMP13P45452 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
MMP13P45452 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
MMP13P45452 CROT-203ENST00000419147 2959 ntTSL 2 BASIC15.21■□□□□ 0.02
MMP13P45452 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
MMP13P45452 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
MMP13P45452 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
MMP13P45452 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
MMP13P45452 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
MMP13P45452 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP13P45452 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP13P45452 AC020910.5-201ENST00000623668 1865 ntBASIC15.2■□□□□ 0.02
MMP13P45452 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MMP13P45452 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP13P45452 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP13P45452 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP13P45452 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP13P45452 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP13P45452 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP13P45452 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP13P45452 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
MMP13P45452 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP13P45452 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP13P45452 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.2■□□□□ 0.02
MMP13P45452 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP13P45452 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP13P45452 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MMP13P45452 AP000593.2-201ENST00000542775 1433 ntBASIC15.2■□□□□ 0.02
MMP13P45452 AC005562.1-201ENST00000583030 3219 ntBASIC15.2■□□□□ 0.02
MMP13P45452 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
MMP13P45452 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP13P45452 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP13P45452 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP13P45452 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.2■□□□□ 0.02
MMP13P45452 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP13P45452 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP13P45452 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP13P45452 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.2■□□□□ 0.02
MMP13P45452 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP13P45452 AC004945.1-201ENST00000416738 983 ntBASIC15.2■□□□□ 0.02
MMP13P45452 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.2■□□□□ 0.02
MMP13P45452 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP13P45452 ACA64.2-201ENST00000459014 129 ntBASIC15.2■□□□□ 0.02
MMP13P45452 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
MMP13P45452 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.2■□□□□ 0.02
MMP13P45452 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MMP13P45452 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.2■□□□□ 0.02
MMP13P45452 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.2■□□□□ 0.02
MMP13P45452 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.2■□□□□ 0.02
MMP13P45452 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MMP13P45452 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP13P45452 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.2■□□□□ 0.02
MMP13P45452 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP13P45452 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.2■□□□□ 0.02
MMP13P45452 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
MMP13P45452 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP13P45452 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
MMP13P45452 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP13P45452 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
MMP13P45452 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MMP13P45452 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MMP13P45452 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC15.2■□□□□ 0.02
MMP13P45452 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.2■□□□□ 0.02
MMP13P45452 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms