Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
FDFT1P37268 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.92□□□□□ -0.02
FDFT1P37268 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
FDFT1P37268 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.92□□□□□ -0.02
FDFT1P37268 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
FDFT1P37268 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
FDFT1P37268 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
FDFT1P37268 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FDFT1P37268 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FDFT1P37268 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
FDFT1P37268 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.91□□□□□ -0.02
FDFT1P37268 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
FDFT1P37268 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
FDFT1P37268 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.91□□□□□ -0.02
FDFT1P37268 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.91□□□□□ -0.02
FDFT1P37268 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.91□□□□□ -0.02
FDFT1P37268 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
FDFT1P37268 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
FDFT1P37268 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.91□□□□□ -0.02
FDFT1P37268 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.91□□□□□ -0.02
FDFT1P37268 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FDFT1P37268 AL512384.1-201ENST00000406683 331 ntBASIC14.91□□□□□ -0.02
FDFT1P37268 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.91□□□□□ -0.02
FDFT1P37268 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
FDFT1P37268 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.91□□□□□ -0.02
FDFT1P37268 CNN2P8-201ENST00000421872 913 ntBASIC14.91□□□□□ -0.02
FDFT1P37268 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.91□□□□□ -0.02
FDFT1P37268 AL161932.2-201ENST00000435436 679 ntBASIC14.91□□□□□ -0.02
FDFT1P37268 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.91□□□□□ -0.02
FDFT1P37268 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
FDFT1P37268 CICP12-201ENST00000455801 843 ntBASIC14.91□□□□□ -0.02
FDFT1P37268 RN7SL692P-201ENST00000464677 288 ntBASIC14.91□□□□□ -0.02
FDFT1P37268 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
FDFT1P37268 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
FDFT1P37268 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FDFT1P37268 COX5BP1-201ENST00000507622 393 ntBASIC14.91□□□□□ -0.02
FDFT1P37268 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
FDFT1P37268 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.91□□□□□ -0.02
FDFT1P37268 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.91□□□□□ -0.02
FDFT1P37268 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.91□□□□□ -0.02
FDFT1P37268 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.91□□□□□ -0.02
FDFT1P37268 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.91□□□□□ -0.02
FDFT1P37268 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.91□□□□□ -0.02
FDFT1P37268 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
FDFT1P37268 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.91□□□□□ -0.02
FDFT1P37268 AC027601.3-201ENST00000622907 509 ntBASIC14.91□□□□□ -0.02
FDFT1P37268 AC138951.2-201ENST00000623455 1161 ntBASIC14.91□□□□□ -0.02
FDFT1P37268 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
FDFT1P37268 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FDFT1P37268 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FDFT1P37268 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FDFT1P37268 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
FDFT1P37268 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
FDFT1P37268 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
FDFT1P37268 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
FDFT1P37268 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.91□□□□□ -0.02
FDFT1P37268 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.91□□□□□ -0.02
FDFT1P37268 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.91□□□□□ -0.02
FDFT1P37268 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
FDFT1P37268 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.9□□□□□ -0.02
FDFT1P37268 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FDFT1P37268 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
FDFT1P37268 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
FDFT1P37268 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FDFT1P37268 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.9□□□□□ -0.02
FDFT1P37268 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
FDFT1P37268 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.9□□□□□ -0.02
FDFT1P37268 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.9□□□□□ -0.02
FDFT1P37268 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.9□□□□□ -0.02
FDFT1P37268 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FDFT1P37268 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FDFT1P37268 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.9□□□□□ -0.02
FDFT1P37268 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
FDFT1P37268 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
FDFT1P37268 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
FDFT1P37268 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
FDFT1P37268 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
FDFT1P37268 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.9□□□□□ -0.02
FDFT1P37268 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
FDFT1P37268 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
FDFT1P37268 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.9□□□□□ -0.02
FDFT1P37268 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
FDFT1P37268 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
FDFT1P37268 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.9□□□□□ -0.02
FDFT1P37268 AC078819.1-201ENST00000547454 765 ntBASIC14.9□□□□□ -0.02
FDFT1P37268 AC012085.1-201ENST00000548270 765 ntBASIC14.9□□□□□ -0.02
FDFT1P37268 KRT90P-201ENST00000549264 1064 ntBASIC14.9□□□□□ -0.02
FDFT1P37268 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
FDFT1P37268 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
FDFT1P37268 AC073413.1-201ENST00000603927 732 ntBASIC14.9□□□□□ -0.02
FDFT1P37268 AC244669.2-201ENST00000612320 853 ntBASIC14.9□□□□□ -0.02
FDFT1P37268 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.9□□□□□ -0.02
FDFT1P37268 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
FDFT1P37268 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FDFT1P37268 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
FDFT1P37268 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
FDFT1P37268 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
FDFT1P37268 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.9□□□□□ -0.02
FDFT1P37268 AC138969.2-201ENST00000532739 9932 ntBASIC14.9□□□□□ -0.02
FDFT1P37268 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms