Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 YBX2P1-201ENST00000394192 760 ntBASIC12.99□□□□□ -0.33
CD40LGP29965 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CD40LGP29965 AL133267.1-201ENST00000398220 340 ntBASIC12.99□□□□□ -0.33
CD40LGP29965 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.99□□□□□ -0.33
CD40LGP29965 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD40LGP29965 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC12.99□□□□□ -0.33
CD40LGP29965 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC12.99□□□□□ -0.33
CD40LGP29965 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CD40LGP29965 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CD40LGP29965 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC12.99□□□□□ -0.33
CD40LGP29965 RARRES2P8-201ENST00000566335 367 ntBASIC12.99□□□□□ -0.33
CD40LGP29965 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC12.99□□□□□ -0.33
CD40LGP29965 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC12.99□□□□□ -0.33
CD40LGP29965 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CD40LGP29965 AC026979.3-201ENST00000607315 403 ntBASIC12.99□□□□□ -0.33
CD40LGP29965 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
CD40LGP29965 AC079781.4-201ENST00000641908 219 ntBASIC12.99□□□□□ -0.33
CD40LGP29965 AC092865.6-201ENST00000642101 219 ntBASIC12.99□□□□□ -0.33
CD40LGP29965 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CD40LGP29965 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD40LGP29965 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD40LGP29965 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC12.99□□□□□ -0.33
CD40LGP29965 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CD40LGP29965 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
CD40LGP29965 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.99□□□□□ -0.33
CD40LGP29965 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CD40LGP29965 PER1-202ENST00000354903 3115 ntTSL 2 BASIC12.99□□□□□ -0.33
CD40LGP29965 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD40LGP29965 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC12.99□□□□□ -0.33
CD40LGP29965 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CD40LGP29965 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CD40LGP29965 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.99□□□□□ -0.33
CD40LGP29965 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD40LGP29965 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CD40LGP29965 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC12.99□□□□□ -0.33
CD40LGP29965 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD40LGP29965 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD40LGP29965 AL359845.1-201ENST00000458202 1648 ntBASIC12.99□□□□□ -0.33
CD40LGP29965 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC12.99□□□□□ -0.33
CD40LGP29965 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
CD40LGP29965 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD40LGP29965 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD40LGP29965 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD40LGP29965 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD40LGP29965 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC12.98□□□□□ -0.33
CD40LGP29965 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CD40LGP29965 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC12.98□□□□□ -0.33
CD40LGP29965 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
CD40LGP29965 AL021155.1-201ENST00000438808 2637 ntBASIC12.98□□□□□ -0.33
CD40LGP29965 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CD40LGP29965 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD40LGP29965 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC12.98□□□□□ -0.33
CD40LGP29965 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD40LGP29965 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD40LGP29965 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CD40LGP29965 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CD40LGP29965 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
CD40LGP29965 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.98□□□□□ -0.33
CD40LGP29965 AKAP8P1-201ENST00000434743 1349 ntBASIC12.98□□□□□ -0.33
CD40LGP29965 TUBB8P4-201ENST00000511806 1324 ntBASIC12.98□□□□□ -0.33
CD40LGP29965 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD40LGP29965 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CD40LGP29965 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD40LGP29965 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
CD40LGP29965 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD40LGP29965 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD40LGP29965 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
CD40LGP29965 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC12.98□□□□□ -0.33
CD40LGP29965 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD40LGP29965 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
CD40LGP29965 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.98□□□□□ -0.33
CD40LGP29965 AL671277.1-201ENST00000429656 993 ntBASIC12.98□□□□□ -0.33
CD40LGP29965 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CD40LGP29965 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC12.98□□□□□ -0.33
CD40LGP29965 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC12.98□□□□□ -0.33
CD40LGP29965 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC12.98□□□□□ -0.33
CD40LGP29965 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CD40LGP29965 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC12.98□□□□□ -0.33
CD40LGP29965 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.98□□□□□ -0.33
CD40LGP29965 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CD40LGP29965 GATB-205ENST00000508611 605 ntTSL 2 BASIC12.98□□□□□ -0.33
CD40LGP29965 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC12.98□□□□□ -0.33
CD40LGP29965 PGAM5P1-201ENST00000518923 814 ntBASIC12.98□□□□□ -0.33
CD40LGP29965 IGHV3-62-201ENST00000520057 340 ntBASIC12.98□□□□□ -0.33
CD40LGP29965 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC12.98□□□□□ -0.33
CD40LGP29965 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC12.98□□□□□ -0.33
CD40LGP29965 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD40LGP29965 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
CD40LGP29965 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC12.98□□□□□ -0.33
CD40LGP29965 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
CD40LGP29965 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC12.98□□□□□ -0.33
CD40LGP29965 AP002472.1-201ENST00000577490 586 ntBASIC12.98□□□□□ -0.33
CD40LGP29965 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC12.98□□□□□ -0.33
CD40LGP29965 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC12.98□□□□□ -0.33
CD40LGP29965 AC091812.2-201ENST00000619081 385 ntBASIC12.98□□□□□ -0.33
CD40LGP29965 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CD40LGP29965 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD40LGP29965 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD40LGP29965 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CD40LGP29965 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms