Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC12.55□□□□□ -0.4
TNFSF4P23510 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TNFSF4P23510 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TNFSF4P23510 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
TNFSF4P23510 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
TNFSF4P23510 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TNFSF4P23510 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.55□□□□□ -0.4
TNFSF4P23510 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TNFSF4P23510 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TNFSF4P23510 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC12.55□□□□□ -0.4
TNFSF4P23510 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TNFSF4P23510 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
TNFSF4P23510 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TNFSF4P23510 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TNFSF4P23510 AC010141.1-201ENST00000411585 623 ntBASIC12.55□□□□□ -0.4
TNFSF4P23510 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TNFSF4P23510 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC12.55□□□□□ -0.4
TNFSF4P23510 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC12.55□□□□□ -0.4
TNFSF4P23510 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
TNFSF4P23510 APOA2-204ENST00000464492 530 ntTSL 3 BASIC12.55□□□□□ -0.4
TNFSF4P23510 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
TNFSF4P23510 AC100850.1-201ENST00000506768 649 ntBASIC12.55□□□□□ -0.4
TNFSF4P23510 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
TNFSF4P23510 FAM86HP-204ENST00000513466 959 ntBASIC12.55□□□□□ -0.4
TNFSF4P23510 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC12.55□□□□□ -0.4
TNFSF4P23510 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC12.55□□□□□ -0.4
TNFSF4P23510 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC12.55□□□□□ -0.4
TNFSF4P23510 FAM8A2P-201ENST00000528813 1142 ntBASIC12.55□□□□□ -0.4
TNFSF4P23510 DUX4L46-201ENST00000566845 751 ntBASIC12.55□□□□□ -0.4
TNFSF4P23510 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC12.55□□□□□ -0.4
TNFSF4P23510 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC12.55□□□□□ -0.4
TNFSF4P23510 RN7SL371P-201ENST00000578099 267 ntBASIC12.55□□□□□ -0.4
TNFSF4P23510 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC12.55□□□□□ -0.4
TNFSF4P23510 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC12.55□□□□□ -0.4
TNFSF4P23510 AC009884.2-201ENST00000603110 324 ntBASIC12.55□□□□□ -0.4
TNFSF4P23510 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC12.55□□□□□ -0.4
TNFSF4P23510 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.55□□□□□ -0.4
TNFSF4P23510 AL023803.2-201ENST00000620080 638 ntBASIC12.55□□□□□ -0.4
TNFSF4P23510 AL033527.4-201ENST00000641026 673 ntBASIC12.55□□□□□ -0.4
TNFSF4P23510 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TNFSF4P23510 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.55□□□□□ -0.4
TNFSF4P23510 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
TNFSF4P23510 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TNFSF4P23510 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.55□□□□□ -0.4
TNFSF4P23510 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
TNFSF4P23510 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TNFSF4P23510 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
TNFSF4P23510 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TNFSF4P23510 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.55□□□□□ -0.4
TNFSF4P23510 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TNFSF4P23510 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.55□□□□□ -0.4
TNFSF4P23510 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.55□□□□□ -0.4
TNFSF4P23510 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
TNFSF4P23510 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
TNFSF4P23510 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
TNFSF4P23510 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TNFSF4P23510 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TNFSF4P23510 AC015688.4-201ENST00000580780 1647 ntBASIC12.55□□□□□ -0.4
TNFSF4P23510 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TNFSF4P23510 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TNFSF4P23510 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.54□□□□□ -0.4
TNFSF4P23510 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.54□□□□□ -0.4
TNFSF4P23510 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TNFSF4P23510 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
TNFSF4P23510 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
TNFSF4P23510 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFSF4P23510 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFSF4P23510 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.54□□□□□ -0.4
TNFSF4P23510 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TNFSF4P23510 SON-203ENST00000381679 7860 ntTSL 5 BASIC12.54□□□□□ -0.4
TNFSF4P23510 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFSF4P23510 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFSF4P23510 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
TNFSF4P23510 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
TNFSF4P23510 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12.54□□□□□ -0.4
TNFSF4P23510 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TNFSF4P23510 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFSF4P23510 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFSF4P23510 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFSF4P23510 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFSF4P23510 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC12.54□□□□□ -0.4
TNFSF4P23510 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFSF4P23510 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFSF4P23510 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
TNFSF4P23510 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFSF4P23510 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TNFSF4P23510 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TNFSF4P23510 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TNFSF4P23510 AL354877.1-201ENST00000424412 413 ntBASIC12.54□□□□□ -0.4
TNFSF4P23510 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
TNFSF4P23510 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TNFSF4P23510 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC12.54□□□□□ -0.4
TNFSF4P23510 AGER-214ENST00000538695 487 ntTSL 2 BASIC12.54□□□□□ -0.4
TNFSF4P23510 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC12.54□□□□□ -0.4
TNFSF4P23510 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TNFSF4P23510 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC12.54□□□□□ -0.4
TNFSF4P23510 KLK11-210ENST00000600362 759 ntTSL 3 BASIC12.54□□□□□ -0.4
TNFSF4P23510 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
TNFSF4P23510 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TNFSF4P23510 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms