Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MSR1P21757 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
MSR1P21757 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
MSR1P21757 MXI1-205ENST00000393134 889 ntTSL 2 BASIC12.94□□□□□ -0.34
MSR1P21757 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC12.94□□□□□ -0.34
MSR1P21757 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
MSR1P21757 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MSR1P21757 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC12.94□□□□□ -0.34
MSR1P21757 RGS5-214ENST00000429865 754 ntTSL 3 BASIC12.94□□□□□ -0.34
MSR1P21757 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.94□□□□□ -0.34
MSR1P21757 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC12.94□□□□□ -0.34
MSR1P21757 CROCCP4-201ENST00000457096 498 ntBASIC12.94□□□□□ -0.34
MSR1P21757 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.94□□□□□ -0.34
MSR1P21757 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MSR1P21757 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MSR1P21757 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.94□□□□□ -0.34
MSR1P21757 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC12.94□□□□□ -0.34
MSR1P21757 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.94□□□□□ -0.34
MSR1P21757 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC12.94□□□□□ -0.34
MSR1P21757 PPY2P-201ENST00000582808 702 ntBASIC12.94□□□□□ -0.34
MSR1P21757 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MSR1P21757 AC092053.3-201ENST00000641308 4975 ntBASIC12.94□□□□□ -0.34
MSR1P21757 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
MSR1P21757 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MSR1P21757 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.94□□□□□ -0.34
MSR1P21757 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
MSR1P21757 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MSR1P21757 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.94□□□□□ -0.34
MSR1P21757 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.94□□□□□ -0.34
MSR1P21757 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MSR1P21757 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
MSR1P21757 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.94□□□□□ -0.34
MSR1P21757 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MSR1P21757 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MSR1P21757 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
MSR1P21757 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MSR1P21757 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
MSR1P21757 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
MSR1P21757 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
MSR1P21757 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MSR1P21757 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC12.94□□□□□ -0.34
MSR1P21757 KRT8P28-201ENST00000433288 1390 ntBASIC12.94□□□□□ -0.34
MSR1P21757 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.94□□□□□ -0.34
MSR1P21757 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
MSR1P21757 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
MSR1P21757 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MSR1P21757 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
MSR1P21757 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MSR1P21757 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MSR1P21757 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
MSR1P21757 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
MSR1P21757 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MSR1P21757 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
MSR1P21757 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
MSR1P21757 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
MSR1P21757 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC12.93□□□□□ -0.34
MSR1P21757 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC12.93□□□□□ -0.34
MSR1P21757 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MSR1P21757 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
MSR1P21757 AC011498.7-201ENST00000624986 2027 ntBASIC12.93□□□□□ -0.34
MSR1P21757 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
MSR1P21757 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
MSR1P21757 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
MSR1P21757 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.93□□□□□ -0.34
MSR1P21757 AC020910.6-201ENST00000623084 1459 ntBASIC12.93□□□□□ -0.34
MSR1P21757 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.93□□□□□ -0.34
MSR1P21757 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
MSR1P21757 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC12.93□□□□□ -0.34
MSR1P21757 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
MSR1P21757 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.93□□□□□ -0.34
MSR1P21757 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MSR1P21757 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
MSR1P21757 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MSR1P21757 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
MSR1P21757 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
MSR1P21757 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
MSR1P21757 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
MSR1P21757 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
MSR1P21757 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC12.93□□□□□ -0.34
MSR1P21757 KLF2P4-201ENST00000451959 1225 ntBASIC12.93□□□□□ -0.34
MSR1P21757 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.93□□□□□ -0.34
MSR1P21757 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
MSR1P21757 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
MSR1P21757 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC12.93□□□□□ -0.34
MSR1P21757 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC12.93□□□□□ -0.34
MSR1P21757 AC027237.1-201ENST00000560942 655 ntBASIC12.93□□□□□ -0.34
MSR1P21757 C2orf69P2-201ENST00000562032 1123 ntBASIC12.93□□□□□ -0.34
MSR1P21757 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC12.93□□□□□ -0.34
MSR1P21757 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.93□□□□□ -0.34
MSR1P21757 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC12.93□□□□□ -0.34
MSR1P21757 AL358472.3-201ENST00000608147 415 ntBASIC12.93□□□□□ -0.34
MSR1P21757 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.93□□□□□ -0.34
MSR1P21757 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.93□□□□□ -0.34
MSR1P21757 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
MSR1P21757 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.93□□□□□ -0.34
MSR1P21757 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MSR1P21757 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
MSR1P21757 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MSR1P21757 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
MSR1P21757 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms