Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATF3P18847 AC007952.5-201ENST00000572818 1486 ntBASIC19.6■□□□□ 0.73
ATF3P18847 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
ATF3P18847 PCDHA1-201ENST00000378133 2726 ntBASIC19.6■□□□□ 0.73
ATF3P18847 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
ATF3P18847 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC19.6■□□□□ 0.73
ATF3P18847 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATF3P18847 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC19.6■□□□□ 0.73
ATF3P18847 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC19.6■□□□□ 0.73
ATF3P18847 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC19.6■□□□□ 0.73
ATF3P18847 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATF3P18847 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATF3P18847 LINC00115-201ENST00000473798 1317 ntBASIC19.6■□□□□ 0.73
ATF3P18847 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATF3P18847 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
ATF3P18847 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATF3P18847 OR2W2P-201ENST00000406313 909 ntBASIC19.6■□□□□ 0.73
ATF3P18847 RPL3P2-204ENST00000413027 1203 ntBASIC19.6■□□□□ 0.73
ATF3P18847 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC19.6■□□□□ 0.73
ATF3P18847 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC19.6■□□□□ 0.73
ATF3P18847 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC19.6■□□□□ 0.73
ATF3P18847 ALG1L7P-201ENST00000502317 768 ntBASIC19.6■□□□□ 0.73
ATF3P18847 GPX3-202ENST00000517973 612 ntTSL 3 BASIC19.6■□□□□ 0.73
ATF3P18847 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC19.6■□□□□ 0.73
ATF3P18847 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC19.6■□□□□ 0.73
ATF3P18847 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
ATF3P18847 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
ATF3P18847 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC19.6■□□□□ 0.73
ATF3P18847 SF1-209ENST00000433274 2317 ntTSL 2 BASIC19.6■□□□□ 0.73
ATF3P18847 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC19.6■□□□□ 0.73
ATF3P18847 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATF3P18847 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATF3P18847 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATF3P18847 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATF3P18847 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATF3P18847 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATF3P18847 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATF3P18847 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATF3P18847 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATF3P18847 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
ATF3P18847 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATF3P18847 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATF3P18847 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATF3P18847 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATF3P18847 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATF3P18847 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATF3P18847 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATF3P18847 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC19.59■□□□□ 0.73
ATF3P18847 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATF3P18847 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATF3P18847 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC19.59■□□□□ 0.73
ATF3P18847 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATF3P18847 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
ATF3P18847 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.59■□□□□ 0.73
ATF3P18847 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
ATF3P18847 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC19.59■□□□□ 0.73
ATF3P18847 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC19.59■□□□□ 0.73
ATF3P18847 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATF3P18847 AHCYP3-201ENST00000420053 1279 ntBASIC19.59■□□□□ 0.73
ATF3P18847 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC19.59■□□□□ 0.73
ATF3P18847 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC19.59■□□□□ 0.73
ATF3P18847 CTBP2P6-201ENST00000526402 1229 ntBASIC19.59■□□□□ 0.73
ATF3P18847 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
ATF3P18847 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC19.59■□□□□ 0.73
ATF3P18847 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC19.59■□□□□ 0.73
ATF3P18847 MT3-202ENST00000561640 514 ntTSL 3 BASIC19.59■□□□□ 0.73
ATF3P18847 AC079414.2-201ENST00000567157 1104 ntBASIC19.59■□□□□ 0.73
ATF3P18847 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC19.59■□□□□ 0.73
ATF3P18847 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC19.59■□□□□ 0.73
ATF3P18847 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC19.59■□□□□ 0.73
ATF3P18847 AL353622.2-201ENST00000605846 425 ntBASIC19.59■□□□□ 0.73
ATF3P18847 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
ATF3P18847 AL357143.1-203ENST00000639750 881 ntBASIC19.59■□□□□ 0.73
ATF3P18847 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC19.59■□□□□ 0.73
ATF3P18847 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATF3P18847 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC19.59■□□□□ 0.73
ATF3P18847 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.59■□□□□ 0.73
ATF3P18847 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
ATF3P18847 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC19.59■□□□□ 0.73
ATF3P18847 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATF3P18847 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATF3P18847 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATF3P18847 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATF3P18847 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.59■□□□□ 0.73
ATF3P18847 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC19.59■□□□□ 0.73
ATF3P18847 AC117503.4-201ENST00000623229 1418 ntBASIC19.59■□□□□ 0.73
ATF3P18847 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATF3P18847 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATF3P18847 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ATF3P18847 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATF3P18847 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATF3P18847 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC19.58■□□□□ 0.73
ATF3P18847 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ATF3P18847 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATF3P18847 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
ATF3P18847 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATF3P18847 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC19.58■□□□□ 0.73
ATF3P18847 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATF3P18847 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
ATF3P18847 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms