Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
NCK1P16333 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.85□□□□□ -0.19
NCK1P16333 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NCK1P16333 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
NCK1P16333 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NCK1P16333 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NCK1P16333 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
NCK1P16333 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
NCK1P16333 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.85□□□□□ -0.19
NCK1P16333 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NCK1P16333 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NCK1P16333 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NCK1P16333 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NCK1P16333 BTBD7P1-201ENST00000447253 1453 ntBASIC13.85□□□□□ -0.19
NCK1P16333 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NCK1P16333 C8orf49-201ENST00000525043 1968 ntBASIC13.85□□□□□ -0.19
NCK1P16333 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
NCK1P16333 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NCK1P16333 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
NCK1P16333 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.85□□□□□ -0.19
NCK1P16333 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NCK1P16333 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
NCK1P16333 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
NCK1P16333 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.85□□□□□ -0.19
NCK1P16333 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
NCK1P16333 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
NCK1P16333 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
NCK1P16333 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NCK1P16333 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC13.84□□□□□ -0.19
NCK1P16333 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NCK1P16333 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.84□□□□□ -0.19
NCK1P16333 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
NCK1P16333 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.84□□□□□ -0.19
NCK1P16333 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NCK1P16333 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC13.84□□□□□ -0.19
NCK1P16333 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
NCK1P16333 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
NCK1P16333 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.84□□□□□ -0.19
NCK1P16333 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
NCK1P16333 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
NCK1P16333 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NCK1P16333 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC13.84□□□□□ -0.19
NCK1P16333 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NCK1P16333 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NCK1P16333 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
NCK1P16333 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NCK1P16333 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.84□□□□□ -0.19
NCK1P16333 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NCK1P16333 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NCK1P16333 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
NCK1P16333 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NCK1P16333 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
NCK1P16333 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NCK1P16333 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NCK1P16333 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NCK1P16333 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NCK1P16333 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NCK1P16333 KLF2P2-201ENST00000416807 1039 ntBASIC13.84□□□□□ -0.19
NCK1P16333 AP000347.1-202ENST00000435868 847 ntBASIC13.84□□□□□ -0.19
NCK1P16333 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.84□□□□□ -0.19
NCK1P16333 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.84□□□□□ -0.19
NCK1P16333 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.84□□□□□ -0.19
NCK1P16333 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
NCK1P16333 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.84□□□□□ -0.19
NCK1P16333 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.84□□□□□ -0.19
NCK1P16333 AC004449.1-201ENST00000564240 433 ntBASIC13.84□□□□□ -0.19
NCK1P16333 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.84□□□□□ -0.19
NCK1P16333 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.84□□□□□ -0.19
NCK1P16333 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NCK1P16333 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.84□□□□□ -0.19
NCK1P16333 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
NCK1P16333 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.84□□□□□ -0.19
NCK1P16333 AC007431.3-201ENST00000623221 587 ntBASIC13.84□□□□□ -0.19
NCK1P16333 AC134684.3-201ENST00000641758 218 ntBASIC13.84□□□□□ -0.19
NCK1P16333 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NCK1P16333 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
NCK1P16333 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NCK1P16333 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
NCK1P16333 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NCK1P16333 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NCK1P16333 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
NCK1P16333 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NCK1P16333 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.84□□□□□ -0.19
NCK1P16333 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NCK1P16333 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
NCK1P16333 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.84□□□□□ -0.19
NCK1P16333 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NCK1P16333 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NCK1P16333 TUBB8P4-201ENST00000511806 1324 ntBASIC13.84□□□□□ -0.19
NCK1P16333 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NCK1P16333 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NCK1P16333 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NCK1P16333 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NCK1P16333 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC13.84□□□□□ -0.19
NCK1P16333 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
NCK1P16333 NCLP1-201ENST00000445357 1963 ntBASIC13.83□□□□□ -0.19
NCK1P16333 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.19
NCK1P16333 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
NCK1P16333 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
NCK1P16333 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms