Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VCANP13611 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VCANP13611 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.61□□□□□ -0.07
VCANP13611 SLC36A1-211ENST00000616007 1389 ntTSL 2 BASIC14.61□□□□□ -0.07
VCANP13611 NLK-203ENST00000582037 1503 ntTSL 2 BASIC14.61□□□□□ -0.07
VCANP13611 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VCANP13611 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
VCANP13611 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VCANP13611 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VCANP13611 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
VCANP13611 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.61□□□□□ -0.07
VCANP13611 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VCANP13611 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VCANP13611 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VCANP13611 MTHFR-217ENST00000641820 1569 ntBASIC14.61□□□□□ -0.07
VCANP13611 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VCANP13611 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VCANP13611 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VCANP13611 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VCANP13611 PSME2P2-201ENST00000453033 700 ntBASIC14.61□□□□□ -0.07
VCANP13611 AC005011.1-201ENST00000455206 210 ntBASIC14.61□□□□□ -0.07
VCANP13611 TRBV11-2-201ENST00000471935 408 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VCANP13611 AF186996.6-201ENST00000485294 149 ntBASIC14.61□□□□□ -0.07
VCANP13611 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.61□□□□□ -0.07
VCANP13611 IGHV7-56-201ENST00000518372 351 ntBASIC14.61□□□□□ -0.07
VCANP13611 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VCANP13611 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VCANP13611 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VCANP13611 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VCANP13611 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.61□□□□□ -0.07
VCANP13611 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VCANP13611 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC14.61□□□□□ -0.07
VCANP13611 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
VCANP13611 AC136621.1-201ENST00000624017 2304 ntBASIC14.61□□□□□ -0.07
VCANP13611 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VCANP13611 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VCANP13611 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.61□□□□□ -0.07
VCANP13611 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.61□□□□□ -0.07
VCANP13611 IGHV1OR15-9-201ENST00000338912 353 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
VCANP13611 TSACC-203ENST00000368253 512 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VCANP13611 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VCANP13611 GOLGA2P8-201ENST00000505201 779 ntBASIC14.6□□□□□ -0.07
VCANP13611 DUX4L33-201ENST00000635217 958 ntBASIC14.6□□□□□ -0.07
VCANP13611 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
VCANP13611 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.6□□□□□ -0.07
VCANP13611 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
VCANP13611 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC14.6□□□□□ -0.07
VCANP13611 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
VCANP13611 AL603832.2-201ENST00000566195 2125 ntBASIC14.6□□□□□ -0.07
VCANP13611 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VCANP13611 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VCANP13611 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VCANP13611 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VCANP13611 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC14.6□□□□□ -0.07
VCANP13611 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VCANP13611 AC069421.1-201ENST00000447462 323 ntBASIC14.6□□□□□ -0.07
VCANP13611 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC14.6□□□□□ -0.07
VCANP13611 MIR6871-201ENST00000613433 56 ntBASIC14.6□□□□□ -0.07
VCANP13611 PDXDC2P-206ENST00000534700 1315 ntBASIC14.6□□□□□ -0.07
VCANP13611 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VCANP13611 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
VCANP13611 MYL1-202ENST00000352451 1065 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VCANP13611 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.6□□□□□ -0.07
VCANP13611 TUBB2BP1-201ENST00000404155 871 ntBASIC14.6□□□□□ -0.07
VCANP13611 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC14.6□□□□□ -0.07
VCANP13611 AC069257.3-201ENST00000431391 708 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
VCANP13611 AC005014.1-201ENST00000432006 2976 ntBASIC14.6□□□□□ -0.07
VCANP13611 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC14.6□□□□□ -0.07
VCANP13611 PARVG-208ENST00000466375 820 ntTSL 2 BASIC14.6□□□□□ -0.07
VCANP13611 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VCANP13611 AC091691.1-201ENST00000583587 1018 ntBASIC14.6□□□□□ -0.07
VCANP13611 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
VCANP13611 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC14.6□□□□□ -0.07
VCANP13611 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
VCANP13611 LILRP1-201ENST00000444199 1370 ntBASIC14.6□□□□□ -0.07
VCANP13611 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
VCANP13611 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VCANP13611 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VCANP13611 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.59□□□□□ -0.07
VCANP13611 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.59□□□□□ -0.07
VCANP13611 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VCANP13611 IMMP1L-201ENST00000278200 795 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
VCANP13611 MGST3-204ENST00000367888 778 ntTSL 3 BASIC14.59□□□□□ -0.07
VCANP13611 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC14.59□□□□□ -0.07
VCANP13611 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC14.59□□□□□ -0.07
VCANP13611 STEAP2-AS1-202ENST00000478318 627 ntTSL 3 BASIC14.59□□□□□ -0.07
VCANP13611 HINT1-208ENST00000513012 583 ntTSL 4 BASIC14.59□□□□□ -0.07
VCANP13611 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC14.59□□□□□ -0.07
VCANP13611 PXK-210ENST00000479241 2817 ntTSL 2 BASIC14.59□□□□□ -0.07
VCANP13611 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
VCANP13611 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VCANP13611 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VCANP13611 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VCANP13611 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC14.59□□□□□ -0.07
VCANP13611 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VCANP13611 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC14.59□□□□□ -0.07
VCANP13611 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VCANP13611 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
VCANP13611 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
VCANP13611 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms