Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RB1P06400 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RB1P06400 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RB1P06400 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RB1P06400 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.25■□□□□ 0.03
RB1P06400 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RB1P06400 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
RB1P06400 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RB1P06400 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RB1P06400 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RB1P06400 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RB1P06400 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RB1P06400 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
RB1P06400 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
RB1P06400 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RB1P06400 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC15.25■□□□□ 0.03
RB1P06400 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC15.25■□□□□ 0.03
RB1P06400 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC15.25■□□□□ 0.03
RB1P06400 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RB1P06400 RN7SL582P-201ENST00000491078 279 ntBASIC15.25■□□□□ 0.03
RB1P06400 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC15.25■□□□□ 0.03
RB1P06400 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RB1P06400 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RB1P06400 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC15.25■□□□□ 0.03
RB1P06400 AL021707.6-201ENST00000609212 491 ntBASIC15.25■□□□□ 0.03
RB1P06400 AL359091.4-201ENST00000610052 409 ntBASIC15.25■□□□□ 0.03
RB1P06400 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.25■□□□□ 0.03
RB1P06400 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RB1P06400 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RB1P06400 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RB1P06400 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RB1P06400 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RB1P06400 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RB1P06400 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RB1P06400 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RB1P06400 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RB1P06400 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RB1P06400 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.25■□□□□ 0.03
RB1P06400 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RB1P06400 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RB1P06400 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
RB1P06400 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
RB1P06400 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RB1P06400 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RB1P06400 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RB1P06400 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.24■□□□□ 0.03
RB1P06400 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RB1P06400 FUCA1P1-201ENST00000374476 1351 ntBASIC15.24■□□□□ 0.03
RB1P06400 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RB1P06400 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RB1P06400 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.24■□□□□ 0.03
RB1P06400 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RB1P06400 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC15.24■□□□□ 0.03
RB1P06400 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC15.24■□□□□ 0.03
RB1P06400 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RB1P06400 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RB1P06400 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RB1P06400 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
RB1P06400 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC15.24■□□□□ 0.03
RB1P06400 BX679664.3-201ENST00000414070 555 ntBASIC15.24■□□□□ 0.03
RB1P06400 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC15.24■□□□□ 0.03
RB1P06400 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RB1P06400 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC15.24■□□□□ 0.03
RB1P06400 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC15.24■□□□□ 0.03
RB1P06400 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RB1P06400 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RB1P06400 GRPEL2P1-201ENST00000453145 339 ntBASIC15.24■□□□□ 0.03
RB1P06400 AC113935.1-201ENST00000471722 555 ntBASIC15.24■□□□□ 0.03
RB1P06400 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC15.24■□□□□ 0.03
RB1P06400 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC15.24■□□□□ 0.03
RB1P06400 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC15.24■□□□□ 0.03
RB1P06400 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC15.24■□□□□ 0.03
RB1P06400 OR2A1-AS1-210ENST00000496968 531 ntBASIC15.24■□□□□ 0.03
RB1P06400 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC15.24■□□□□ 0.03
RB1P06400 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC15.24■□□□□ 0.03
RB1P06400 KRT8P2-201ENST00000556193 944 ntBASIC15.24■□□□□ 0.03
RB1P06400 GOLGA2P7-209ENST00000560408 745 ntBASIC15.24■□□□□ 0.03
RB1P06400 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC15.24■□□□□ 0.03
RB1P06400 AC010632.2-201ENST00000588369 1224 ntBASIC15.24■□□□□ 0.03
RB1P06400 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC15.24■□□□□ 0.03
RB1P06400 AP005264.5-201ENST00000590066 467 ntBASIC15.24■□□□□ 0.03
RB1P06400 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
RB1P06400 HMGB1P24-201ENST00000611897 328 ntBASIC15.24■□□□□ 0.03
RB1P06400 AC148477.9-201ENST00000623974 539 ntBASIC15.24■□□□□ 0.03
RB1P06400 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RB1P06400 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RB1P06400 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RB1P06400 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
RB1P06400 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RB1P06400 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RB1P06400 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RB1P06400 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RB1P06400 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RB1P06400 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
RB1P06400 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
RB1P06400 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.24■□□□□ 0.03
RB1P06400 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RB1P06400 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
RB1P06400 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RB1P06400 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms