Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
MT-ND1P03886 SALL4P5-201ENST00000419001 1760 ntBASIC13.85□□□□□ -0.19
MT-ND1P03886 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
MT-ND1P03886 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.85□□□□□ -0.19
MT-ND1P03886 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
MT-ND1P03886 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.85□□□□□ -0.19
MT-ND1P03886 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
MT-ND1P03886 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
MT-ND1P03886 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
MT-ND1P03886 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.85□□□□□ -0.19
MT-ND1P03886 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.84□□□□□ -0.19
MT-ND1P03886 AL591122.2-201ENST00000624125 1853 ntBASIC13.84□□□□□ -0.19
MT-ND1P03886 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
MT-ND1P03886 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MT-ND1P03886 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
MT-ND1P03886 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MT-ND1P03886 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MT-ND1P03886 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MT-ND1P03886 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
MT-ND1P03886 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MT-ND1P03886 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MT-ND1P03886 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
MT-ND1P03886 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
MT-ND1P03886 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.84□□□□□ -0.19
MT-ND1P03886 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
MT-ND1P03886 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC13.84□□□□□ -0.19
MT-ND1P03886 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
MT-ND1P03886 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.84□□□□□ -0.19
MT-ND1P03886 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
MT-ND1P03886 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
MT-ND1P03886 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MT-ND1P03886 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.84□□□□□ -0.19
MT-ND1P03886 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.84□□□□□ -0.19
MT-ND1P03886 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.84□□□□□ -0.19
MT-ND1P03886 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MT-ND1P03886 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.84□□□□□ -0.19
MT-ND1P03886 AC026434.2-201ENST00000506094 1078 ntBASIC13.84□□□□□ -0.19
MT-ND1P03886 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.84□□□□□ -0.19
MT-ND1P03886 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MT-ND1P03886 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.84□□□□□ -0.19
MT-ND1P03886 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.84□□□□□ -0.19
MT-ND1P03886 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.84□□□□□ -0.19
MT-ND1P03886 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.84□□□□□ -0.19
MT-ND1P03886 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MT-ND1P03886 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.84□□□□□ -0.19
MT-ND1P03886 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MT-ND1P03886 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MT-ND1P03886 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MT-ND1P03886 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.84□□□□□ -0.19
MT-ND1P03886 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
MT-ND1P03886 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
MT-ND1P03886 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
MT-ND1P03886 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
MT-ND1P03886 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MT-ND1P03886 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MT-ND1P03886 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MT-ND1P03886 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
MT-ND1P03886 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MT-ND1P03886 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MT-ND1P03886 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MT-ND1P03886 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
MT-ND1P03886 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.83□□□□□ -0.19
MT-ND1P03886 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MT-ND1P03886 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
MT-ND1P03886 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MT-ND1P03886 EML1-203ENST00000334192 4064 ntTSL 5 BASIC13.83□□□□□ -0.2
MT-ND1P03886 PCDHA6-201ENST00000378126 3267 ntBASIC13.83□□□□□ -0.2
MT-ND1P03886 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.83□□□□□ -0.2
MT-ND1P03886 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
MT-ND1P03886 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
MT-ND1P03886 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MT-ND1P03886 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.83□□□□□ -0.2
MT-ND1P03886 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
MT-ND1P03886 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
MT-ND1P03886 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MT-ND1P03886 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
MT-ND1P03886 PCDHB18P-202ENST00000526308 3197 ntBASIC13.83□□□□□ -0.2
MT-ND1P03886 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MT-ND1P03886 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MT-ND1P03886 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.83□□□□□ -0.2
MT-ND1P03886 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.83□□□□□ -0.2
MT-ND1P03886 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.83□□□□□ -0.2
MT-ND1P03886 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.83□□□□□ -0.2
MT-ND1P03886 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MT-ND1P03886 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.83□□□□□ -0.2
MT-ND1P03886 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.83□□□□□ -0.2
MT-ND1P03886 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.83□□□□□ -0.2
MT-ND1P03886 FAM86LP-201ENST00000478302 853 ntBASIC13.83□□□□□ -0.2
MT-ND1P03886 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MT-ND1P03886 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.83□□□□□ -0.2
MT-ND1P03886 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.83□□□□□ -0.2
MT-ND1P03886 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.83□□□□□ -0.2
MT-ND1P03886 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.83□□□□□ -0.2
MT-ND1P03886 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
MT-ND1P03886 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
MT-ND1P03886 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MT-ND1P03886 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
MT-ND1P03886 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MT-ND1P03886 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
MT-ND1P03886 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms