Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 REXO1L1P-201ENST00000379010 6598 ntBASIC13.01□□□□□ -0.33
APOC1P02654 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APOC1P02654 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC1P02654 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APOC1P02654 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC1P02654 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
APOC1P02654 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APOC1P02654 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC1P02654 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.01□□□□□ -0.33
APOC1P02654 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC13.01□□□□□ -0.33
APOC1P02654 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.01□□□□□ -0.33
APOC1P02654 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APOC1P02654 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC1P02654 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC1P02654 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
APOC1P02654 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
APOC1P02654 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC1P02654 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC1P02654 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC1P02654 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC1P02654 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.01□□□□□ -0.33
APOC1P02654 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.01□□□□□ -0.33
APOC1P02654 AC245100.3-201ENST00000441281 285 ntBASIC13.01□□□□□ -0.33
APOC1P02654 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.01□□□□□ -0.33
APOC1P02654 TERF1P3-201ENST00000505638 1227 ntBASIC13.01□□□□□ -0.33
APOC1P02654 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.01□□□□□ -0.33
APOC1P02654 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.01□□□□□ -0.33
APOC1P02654 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.01□□□□□ -0.33
APOC1P02654 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.01□□□□□ -0.33
APOC1P02654 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.01□□□□□ -0.33
APOC1P02654 RN7SL48P-201ENST00000579283 293 ntBASIC13.01□□□□□ -0.33
APOC1P02654 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.01□□□□□ -0.33
APOC1P02654 AC008494.3-201ENST00000606615 944 ntBASIC13.01□□□□□ -0.33
APOC1P02654 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.01□□□□□ -0.33
APOC1P02654 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
APOC1P02654 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
APOC1P02654 AL138725.1-201ENST00000407347 1314 ntBASIC13.01□□□□□ -0.33
APOC1P02654 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC1P02654 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APOC1P02654 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC1P02654 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC1P02654 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.01□□□□□ -0.33
APOC1P02654 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
APOC1P02654 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.01□□□□□ -0.33
APOC1P02654 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.01□□□□□ -0.33
APOC1P02654 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.01□□□□□ -0.33
APOC1P02654 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC1P02654 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APOC1P02654 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC1P02654 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC1P02654 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APOC1P02654 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC1P02654 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.01□□□□□ -0.33
APOC1P02654 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC1P02654 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC1P02654 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC1P02654 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
APOC1P02654 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
APOC1P02654 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC1P02654 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
APOC1P02654 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APOC1P02654 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC1P02654 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
APOC1P02654 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APOC1P02654 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
APOC1P02654 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APOC1P02654 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
APOC1P02654 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
APOC1P02654 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC13□□□□□ -0.33
APOC1P02654 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APOC1P02654 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13□□□□□ -0.33
APOC1P02654 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APOC1P02654 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13□□□□□ -0.33
APOC1P02654 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13□□□□□ -0.33
APOC1P02654 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APOC1P02654 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
APOC1P02654 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APOC1P02654 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13□□□□□ -0.33
APOC1P02654 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
APOC1P02654 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
APOC1P02654 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13□□□□□ -0.33
APOC1P02654 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
APOC1P02654 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
APOC1P02654 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13□□□□□ -0.33
APOC1P02654 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
APOC1P02654 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APOC1P02654 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
APOC1P02654 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APOC1P02654 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APOC1P02654 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13□□□□□ -0.33
APOC1P02654 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APOC1P02654 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APOC1P02654 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13□□□□□ -0.33
APOC1P02654 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13□□□□□ -0.33
APOC1P02654 FO681548.1-201ENST00000455617 1132 ntBASIC13□□□□□ -0.33
APOC1P02654 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13□□□□□ -0.33
APOC1P02654 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
APOC1P02654 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13□□□□□ -0.33
APOC1P02654 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13□□□□□ -0.33
APOC1P02654 AC131206.1-201ENST00000538078 1211 ntBASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms