Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
CTNSO60931 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTNSO60931 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTNSO60931 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CTNSO60931 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.68□□□□□ -0.22
CTNSO60931 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTNSO60931 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.67□□□□□ -0.22
CTNSO60931 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTNSO60931 AC104581.4-201ENST00000623126 3052 ntBASIC13.67□□□□□ -0.22
CTNSO60931 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
CTNSO60931 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTNSO60931 AC064801.2-201ENST00000625052 1303 ntBASIC13.67□□□□□ -0.22
CTNSO60931 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CTNSO60931 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTNSO60931 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
CTNSO60931 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CTNSO60931 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTNSO60931 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.67□□□□□ -0.22
CTNSO60931 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTNSO60931 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTNSO60931 AC136759.1-202ENST00000530858 2194 ntBASIC13.67□□□□□ -0.22
CTNSO60931 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTNSO60931 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTNSO60931 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTNSO60931 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTNSO60931 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CTNSO60931 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CTNSO60931 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.67□□□□□ -0.22
CTNSO60931 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC13.67□□□□□ -0.22
CTNSO60931 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.67□□□□□ -0.22
CTNSO60931 ST13P19-201ENST00000442505 1124 ntBASIC13.67□□□□□ -0.22
CTNSO60931 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.67□□□□□ -0.22
CTNSO60931 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CTNSO60931 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.67□□□□□ -0.22
CTNSO60931 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CTNSO60931 AC106794.1-201ENST00000506935 792 ntBASIC13.67□□□□□ -0.22
CTNSO60931 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC13.67□□□□□ -0.22
CTNSO60931 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.67□□□□□ -0.22
CTNSO60931 AP001258.2-201ENST00000529891 490 ntBASIC13.67□□□□□ -0.22
CTNSO60931 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTNSO60931 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.67□□□□□ -0.22
CTNSO60931 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.67□□□□□ -0.22
CTNSO60931 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.67□□□□□ -0.22
CTNSO60931 AC011498.7-201ENST00000624986 2027 ntBASIC13.67□□□□□ -0.22
CTNSO60931 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.67□□□□□ -0.22
CTNSO60931 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CTNSO60931 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CTNSO60931 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CTNSO60931 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTNSO60931 FAM90A7P-201ENST00000382628 1395 ntBASIC13.67□□□□□ -0.22
CTNSO60931 FAM90A23P-201ENST00000400136 1395 ntBASIC13.67□□□□□ -0.22
CTNSO60931 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CTNSO60931 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.67□□□□□ -0.22
CTNSO60931 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.67□□□□□ -0.22
CTNSO60931 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTNSO60931 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CTNSO60931 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.67□□□□□ -0.22
CTNSO60931 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CTNSO60931 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTNSO60931 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTNSO60931 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.67□□□□□ -0.22
CTNSO60931 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTNSO60931 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CTNSO60931 CYP4F23P-201ENST00000593402 1579 ntBASIC13.66□□□□□ -0.22
CTNSO60931 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTNSO60931 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.66□□□□□ -0.22
CTNSO60931 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC13.66□□□□□ -0.22
CTNSO60931 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.66□□□□□ -0.22
CTNSO60931 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
CTNSO60931 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTNSO60931 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTNSO60931 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTNSO60931 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CTNSO60931 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTNSO60931 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.66□□□□□ -0.22
CTNSO60931 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
CTNSO60931 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.66□□□□□ -0.22
CTNSO60931 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTNSO60931 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTNSO60931 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CTNSO60931 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.66□□□□□ -0.22
CTNSO60931 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.66□□□□□ -0.22
CTNSO60931 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CTNSO60931 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTNSO60931 PACS1-203ENST00000524815 628 ntTSL 4 BASIC13.66□□□□□ -0.22
CTNSO60931 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.66□□□□□ -0.22
CTNSO60931 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.66□□□□□ -0.22
CTNSO60931 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.66□□□□□ -0.22
CTNSO60931 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC13.66□□□□□ -0.22
CTNSO60931 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.66□□□□□ -0.22
CTNSO60931 SNORD3B-2-202ENST00000571722 791 ntBASIC13.66□□□□□ -0.22
CTNSO60931 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC13.66□□□□□ -0.22
CTNSO60931 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.66□□□□□ -0.22
CTNSO60931 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC13.66□□□□□ -0.22
CTNSO60931 AC090164.2-201ENST00000611487 516 ntBASIC13.66□□□□□ -0.22
CTNSO60931 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTNSO60931 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.66□□□□□ -0.22
CTNSO60931 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.66□□□□□ -0.22
CTNSO60931 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
CTNSO60931 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms