Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PRAMEF11O60813 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PRAMEF11O60813 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PRAMEF11O60813 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.73□□□□□ -0.05
PRAMEF11O60813 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PRAMEF11O60813 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
PRAMEF11O60813 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
PRAMEF11O60813 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.73□□□□□ -0.05
PRAMEF11O60813 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.73□□□□□ -0.05
PRAMEF11O60813 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PRAMEF11O60813 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PRAMEF11O60813 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PRAMEF11O60813 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PRAMEF11O60813 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
PRAMEF11O60813 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PRAMEF11O60813 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PRAMEF11O60813 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
PRAMEF11O60813 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PRAMEF11O60813 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PRAMEF11O60813 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PRAMEF11O60813 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PRAMEF11O60813 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PRAMEF11O60813 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.72□□□□□ -0.05
PRAMEF11O60813 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.72□□□□□ -0.05
PRAMEF11O60813 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PRAMEF11O60813 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PRAMEF11O60813 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
PRAMEF11O60813 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.72□□□□□ -0.05
PRAMEF11O60813 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PRAMEF11O60813 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
PRAMEF11O60813 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PRAMEF11O60813 AL022313.4-201ENST00000562756 2046 ntBASIC14.72□□□□□ -0.05
PRAMEF11O60813 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PRAMEF11O60813 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PRAMEF11O60813 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
PRAMEF11O60813 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PRAMEF11O60813 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.72□□□□□ -0.05
PRAMEF11O60813 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PRAMEF11O60813 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PRAMEF11O60813 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
PRAMEF11O60813 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PRAMEF11O60813 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PRAMEF11O60813 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PRAMEF11O60813 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.72□□□□□ -0.05
PRAMEF11O60813 SCARNA20.5-201ENST00000516991 142 ntBASIC14.72□□□□□ -0.05
PRAMEF11O60813 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.72□□□□□ -0.05
PRAMEF11O60813 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PRAMEF11O60813 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.72□□□□□ -0.05
PRAMEF11O60813 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
PRAMEF11O60813 MIR3615-201ENST00000581999 87 ntBASIC14.72□□□□□ -0.05
PRAMEF11O60813 GPR182-203ENST00000622922 591 ntBASIC14.72□□□□□ -0.05
PRAMEF11O60813 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PRAMEF11O60813 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.72□□□□□ -0.05
PRAMEF11O60813 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.72□□□□□ -0.05
PRAMEF11O60813 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.72□□□□□ -0.05
PRAMEF11O60813 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PRAMEF11O60813 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PRAMEF11O60813 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.72□□□□□ -0.05
PRAMEF11O60813 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
PRAMEF11O60813 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.72□□□□□ -0.05
PRAMEF11O60813 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PRAMEF11O60813 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.71□□□□□ -0.05
PRAMEF11O60813 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
PRAMEF11O60813 TUBB8P4-201ENST00000511806 1324 ntBASIC14.71□□□□□ -0.05
PRAMEF11O60813 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PRAMEF11O60813 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.71□□□□□ -0.05
PRAMEF11O60813 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
PRAMEF11O60813 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PRAMEF11O60813 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PRAMEF11O60813 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
PRAMEF11O60813 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PRAMEF11O60813 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PRAMEF11O60813 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
PRAMEF11O60813 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PRAMEF11O60813 AL513477.1-201ENST00000602865 2407 ntBASIC14.71□□□□□ -0.05
PRAMEF11O60813 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PRAMEF11O60813 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PRAMEF11O60813 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
PRAMEF11O60813 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
PRAMEF11O60813 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
PRAMEF11O60813 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
PRAMEF11O60813 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.71□□□□□ -0.05
PRAMEF11O60813 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.71□□□□□ -0.05
PRAMEF11O60813 RN7SKP214-201ENST00000364208 315 ntBASIC14.71□□□□□ -0.05
PRAMEF11O60813 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PRAMEF11O60813 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
PRAMEF11O60813 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PRAMEF11O60813 AC011742.3-201ENST00000439053 820 ntBASIC14.71□□□□□ -0.05
PRAMEF11O60813 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.71□□□□□ -0.05
PRAMEF11O60813 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC14.71□□□□□ -0.05
PRAMEF11O60813 AKR7A2P1-201ENST00000460134 915 ntBASIC14.71□□□□□ -0.05
PRAMEF11O60813 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.71□□□□□ -0.05
PRAMEF11O60813 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.71□□□□□ -0.05
PRAMEF11O60813 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.71□□□□□ -0.05
PRAMEF11O60813 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
PRAMEF11O60813 AC244093.1-201ENST00000610837 814 ntBASIC14.71□□□□□ -0.05
PRAMEF11O60813 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.71□□□□□ -0.05
PRAMEF11O60813 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PRAMEF11O60813 AP002353.1-201ENST00000528257 1599 ntBASIC14.71□□□□□ -0.05
PRAMEF11O60813 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms