Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 PTPRVP-205ENST00000641549 5067 ntBASIC11.96□□□□□ -0.49
SSSCA1O60232 TUBB3P1-201ENST00000405796 1332 ntBASIC11.96□□□□□ -0.49
SSSCA1O60232 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
SSSCA1O60232 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC11.96□□□□□ -0.49
SSSCA1O60232 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
SSSCA1O60232 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SSSCA1O60232 STOM-202ENST00000347359 870 ntTSL 2 BASIC11.96□□□□□ -0.49
SSSCA1O60232 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SSSCA1O60232 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SSSCA1O60232 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
SSSCA1O60232 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SSSCA1O60232 CENPM-205ENST00000404067 905 ntTSL 3 BASIC11.96□□□□□ -0.49
SSSCA1O60232 CENPM-206ENST00000407253 818 ntTSL 2 BASIC11.96□□□□□ -0.49
SSSCA1O60232 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC11.96□□□□□ -0.49
SSSCA1O60232 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC11.96□□□□□ -0.49
SSSCA1O60232 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC11.96□□□□□ -0.49
SSSCA1O60232 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC11.96□□□□□ -0.49
SSSCA1O60232 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC11.96□□□□□ -0.49
SSSCA1O60232 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SSSCA1O60232 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC11.96□□□□□ -0.49
SSSCA1O60232 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC11.96□□□□□ -0.49
SSSCA1O60232 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC11.96□□□□□ -0.49
SSSCA1O60232 MTDHP5-201ENST00000598980 586 ntBASIC11.96□□□□□ -0.49
SSSCA1O60232 BX640515.1-201ENST00000617215 977 ntBASIC11.96□□□□□ -0.49
SSSCA1O60232 GPER1-207ENST00000619052 571 ntTSL 2 BASIC11.96□□□□□ -0.49
SSSCA1O60232 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.49
SSSCA1O60232 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
SSSCA1O60232 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC11.96□□□□□ -0.49
SSSCA1O60232 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SSSCA1O60232 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
SSSCA1O60232 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
SSSCA1O60232 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SSSCA1O60232 AL138799.1-201ENST00000448213 1675 ntBASIC11.96□□□□□ -0.5
SSSCA1O60232 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SSSCA1O60232 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SSSCA1O60232 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
SSSCA1O60232 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC11.96□□□□□ -0.5
SSSCA1O60232 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
SSSCA1O60232 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
SSSCA1O60232 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SSSCA1O60232 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
SSSCA1O60232 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
SSSCA1O60232 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
SSSCA1O60232 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC11.96□□□□□ -0.5
SSSCA1O60232 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
SSSCA1O60232 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
SSSCA1O60232 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SSSCA1O60232 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SSSCA1O60232 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SSSCA1O60232 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
SSSCA1O60232 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SSSCA1O60232 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SSSCA1O60232 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SSSCA1O60232 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
SSSCA1O60232 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC11.95□□□□□ -0.5
SSSCA1O60232 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
SSSCA1O60232 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SSSCA1O60232 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
SSSCA1O60232 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC11.95□□□□□ -0.5
SSSCA1O60232 GOLGA8IP-202ENST00000611635 2100 ntBASIC11.95□□□□□ -0.5
SSSCA1O60232 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC11.95□□□□□ -0.5
SSSCA1O60232 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC11.95□□□□□ -0.5
SSSCA1O60232 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC11.95□□□□□ -0.5
SSSCA1O60232 STK3-218ENST00000617590 2485 ntTSL 5 BASIC11.95□□□□□ -0.5
SSSCA1O60232 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC11.95□□□□□ -0.5
SSSCA1O60232 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SSSCA1O60232 TUBB8P4-201ENST00000511806 1324 ntBASIC11.95□□□□□ -0.5
SSSCA1O60232 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SSSCA1O60232 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC11.95□□□□□ -0.5
SSSCA1O60232 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SSSCA1O60232 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
SSSCA1O60232 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SSSCA1O60232 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SSSCA1O60232 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SSSCA1O60232 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
SSSCA1O60232 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
SSSCA1O60232 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
SSSCA1O60232 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC11.95□□□□□ -0.5
SSSCA1O60232 AC004832.2-201ENST00000426397 482 ntBASIC11.95□□□□□ -0.5
SSSCA1O60232 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC11.95□□□□□ -0.5
SSSCA1O60232 TPM4P1-201ENST00000436100 807 ntBASIC11.95□□□□□ -0.5
SSSCA1O60232 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC11.95□□□□□ -0.5
SSSCA1O60232 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC11.95□□□□□ -0.5
SSSCA1O60232 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC11.95□□□□□ -0.5
SSSCA1O60232 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SSSCA1O60232 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC11.95□□□□□ -0.5
SSSCA1O60232 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
SSSCA1O60232 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC11.95□□□□□ -0.5
SSSCA1O60232 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC11.95□□□□□ -0.5
SSSCA1O60232 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC11.95□□□□□ -0.5
SSSCA1O60232 AC107373.2-201ENST00000607735 490 ntBASIC11.95□□□□□ -0.5
SSSCA1O60232 TEX28P1-201ENST00000613479 1221 ntBASIC11.95□□□□□ -0.5
SSSCA1O60232 TEX28P2-201ENST00000617764 1221 ntBASIC11.95□□□□□ -0.5
SSSCA1O60232 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC11.95□□□□□ -0.5
SSSCA1O60232 AC009093.7-201ENST00000623853 1223 ntBASIC11.95□□□□□ -0.5
SSSCA1O60232 AL158212.4-201ENST00000624062 1286 ntBASIC11.95□□□□□ -0.5
SSSCA1O60232 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SSSCA1O60232 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SSSCA1O60232 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
SSSCA1O60232 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC11.95□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms