Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
UPK1AO00322 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.85□□□□□ -0.19
UPK1AO00322 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
UPK1AO00322 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UPK1AO00322 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1AO00322 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1AO00322 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1AO00322 AC072061.1-201ENST00000569710 2234 ntBASIC13.84□□□□□ -0.19
UPK1AO00322 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1AO00322 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1AO00322 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1AO00322 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.84□□□□□ -0.19
UPK1AO00322 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.84□□□□□ -0.19
UPK1AO00322 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1AO00322 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1AO00322 OR2I1P-209ENST00000641730 5365 ntBASIC13.84□□□□□ -0.19
UPK1AO00322 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.84□□□□□ -0.19
UPK1AO00322 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1AO00322 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.84□□□□□ -0.19
UPK1AO00322 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.84□□□□□ -0.19
UPK1AO00322 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
UPK1AO00322 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1AO00322 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1AO00322 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1AO00322 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
UPK1AO00322 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.84□□□□□ -0.19
UPK1AO00322 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1AO00322 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.84□□□□□ -0.19
UPK1AO00322 AC006001.1-201ENST00000325130 474 ntBASIC13.84□□□□□ -0.19
UPK1AO00322 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.84□□□□□ -0.19
UPK1AO00322 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.84□□□□□ -0.19
UPK1AO00322 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1AO00322 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
UPK1AO00322 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1AO00322 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.84□□□□□ -0.19
UPK1AO00322 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1AO00322 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1AO00322 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.84□□□□□ -0.19
UPK1AO00322 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
UPK1AO00322 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.84□□□□□ -0.19
UPK1AO00322 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.84□□□□□ -0.19
UPK1AO00322 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1AO00322 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.84□□□□□ -0.19
UPK1AO00322 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
UPK1AO00322 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.84□□□□□ -0.19
UPK1AO00322 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1AO00322 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.84□□□□□ -0.19
UPK1AO00322 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.84□□□□□ -0.19
UPK1AO00322 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.84□□□□□ -0.19
UPK1AO00322 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1AO00322 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1AO00322 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1AO00322 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1AO00322 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1AO00322 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1AO00322 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1AO00322 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1AO00322 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1AO00322 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UPK1AO00322 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.84□□□□□ -0.19
UPK1AO00322 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC13.84□□□□□ -0.19
UPK1AO00322 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.83□□□□□ -0.19
UPK1AO00322 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.83□□□□□ -0.19
UPK1AO00322 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.83□□□□□ -0.19
UPK1AO00322 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
UPK1AO00322 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.83□□□□□ -0.19
UPK1AO00322 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
UPK1AO00322 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
UPK1AO00322 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.83□□□□□ -0.2
UPK1AO00322 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.83□□□□□ -0.2
UPK1AO00322 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
UPK1AO00322 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UPK1AO00322 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UPK1AO00322 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UPK1AO00322 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
UPK1AO00322 AC139712.1-201ENST00000378256 1875 ntBASIC13.83□□□□□ -0.2
UPK1AO00322 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UPK1AO00322 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
UPK1AO00322 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UPK1AO00322 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
UPK1AO00322 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UPK1AO00322 ARSEP1-201ENST00000420443 635 ntBASIC13.83□□□□□ -0.2
UPK1AO00322 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.83□□□□□ -0.2
UPK1AO00322 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.83□□□□□ -0.2
UPK1AO00322 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.83□□□□□ -0.2
UPK1AO00322 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UPK1AO00322 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.83□□□□□ -0.2
UPK1AO00322 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UPK1AO00322 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
UPK1AO00322 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.83□□□□□ -0.2
UPK1AO00322 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.83□□□□□ -0.2
UPK1AO00322 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UPK1AO00322 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.83□□□□□ -0.2
UPK1AO00322 AC103988.2-201ENST00000561804 725 ntBASIC13.83□□□□□ -0.2
UPK1AO00322 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
UPK1AO00322 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UPK1AO00322 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
UPK1AO00322 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
UPK1AO00322 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
UPK1AO00322 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms