Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 AC004832.2-201ENST00000426397 482 ntBASIC13.85□□□□□ -0.19
AP4S1Q9Y587 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 MIR4453-201ENST00000584019 89 ntBASIC13.85□□□□□ -0.19
AP4S1Q9Y587 IRF5-214ENST00000613821 595 ntTSL 5 BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 AP000437.1-201ENST00000624057 2085 ntBASIC13.85□□□□□ -0.19
AP4S1Q9Y587 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 MKRN5P-201ENST00000445263 1467 ntBASIC13.85□□□□□ -0.19
AP4S1Q9Y587 SON-203ENST00000381679 7860 ntTSL 5 BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 AC023274.1-201ENST00000418278 595 ntBASIC13.84□□□□□ -0.19
AP4S1Q9Y587 MED15P5-201ENST00000423150 992 ntBASIC13.84□□□□□ -0.19
AP4S1Q9Y587 AC136604.1-202ENST00000425471 771 ntBASIC13.84□□□□□ -0.19
AP4S1Q9Y587 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 RBPMS2P1-201ENST00000437762 623 ntBASIC13.84□□□□□ -0.19
AP4S1Q9Y587 SPDYE14P-201ENST00000442619 822 ntBASIC13.84□□□□□ -0.19
AP4S1Q9Y587 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 AC140113.2-201ENST00000604370 208 ntBASIC13.84□□□□□ -0.19
AP4S1Q9Y587 AC027601.4-201ENST00000611259 610 ntBASIC13.84□□□□□ -0.19
AP4S1Q9Y587 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 AL138799.1-201ENST00000448213 1675 ntBASIC13.84□□□□□ -0.19
AP4S1Q9Y587 DLX4-206ENST00000611342 1662 ntBASIC13.84□□□□□ -0.19
AP4S1Q9Y587 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC13.84□□□□□ -0.19
AP4S1Q9Y587 FP325330.2-201ENST00000624219 5630 ntBASIC13.84□□□□□ -0.19
AP4S1Q9Y587 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms