Protein–RNA interactions for Protein: Q9UPA5

BSN, Protein bassoon, humanhuman

Predictions only

Length 3,926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BSNQ9UPA5 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
BSNQ9UPA5 GRPEL2P1-201ENST00000453145 339 ntBASIC12.66□□□□□ -0.38
BSNQ9UPA5 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC12.65□□□□□ -0.38
BSNQ9UPA5 AGAP7P-201ENST00000582299 2062 ntBASIC12.65□□□□□ -0.38
BSNQ9UPA5 AGAP14-201ENST00000624701 2060 ntBASIC12.65□□□□□ -0.38
BSNQ9UPA5 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
BSNQ9UPA5 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
BSNQ9UPA5 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
BSNQ9UPA5 RPL4P6-201ENST00000438116 1304 ntBASIC12.65□□□□□ -0.38
BSNQ9UPA5 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
BSNQ9UPA5 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
BSNQ9UPA5 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
BSNQ9UPA5 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
BSNQ9UPA5 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC12.65□□□□□ -0.38
BSNQ9UPA5 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC12.65□□□□□ -0.38
BSNQ9UPA5 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC12.65□□□□□ -0.38
BSNQ9UPA5 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC12.65□□□□□ -0.38
BSNQ9UPA5 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
BSNQ9UPA5 AL049840.2-201ENST00000602722 535 ntBASIC12.65□□□□□ -0.38
BSNQ9UPA5 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
BSNQ9UPA5 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BSNQ9UPA5 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BSNQ9UPA5 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC12.65□□□□□ -0.38
BSNQ9UPA5 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BSNQ9UPA5 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.65□□□□□ -0.38
BSNQ9UPA5 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BSNQ9UPA5 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BSNQ9UPA5 SSR4-202ENST00000370085 526 ntTSL 2 BASIC12.65□□□□□ -0.38
BSNQ9UPA5 PHBP10-201ENST00000416467 784 ntBASIC12.65□□□□□ -0.38
BSNQ9UPA5 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC12.65□□□□□ -0.38
BSNQ9UPA5 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
BSNQ9UPA5 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC12.65□□□□□ -0.38
BSNQ9UPA5 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC12.65□□□□□ -0.38
BSNQ9UPA5 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BSNQ9UPA5 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
BSNQ9UPA5 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BSNQ9UPA5 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
BSNQ9UPA5 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
BSNQ9UPA5 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BSNQ9UPA5 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BSNQ9UPA5 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
BSNQ9UPA5 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC12.65□□□□□ -0.38
BSNQ9UPA5 AL513477.1-201ENST00000602865 2407 ntBASIC12.65□□□□□ -0.38
BSNQ9UPA5 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
BSNQ9UPA5 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC12.65□□□□□ -0.38
BSNQ9UPA5 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
BSNQ9UPA5 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
BSNQ9UPA5 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.39
BSNQ9UPA5 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
BSNQ9UPA5 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC12.65□□□□□ -0.39
BSNQ9UPA5 RPL10-203ENST00000406022 748 ntTSL 3 BASIC12.65□□□□□ -0.39
BSNQ9UPA5 MIR1226-201ENST00000408658 75 ntBASIC12.65□□□□□ -0.39
BSNQ9UPA5 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
BSNQ9UPA5 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC12.65□□□□□ -0.39
BSNQ9UPA5 RNU1-80P-201ENST00000459500 161 ntBASIC12.65□□□□□ -0.39
BSNQ9UPA5 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.65□□□□□ -0.39
BSNQ9UPA5 DUT-208ENST00000559540 1441 ntTSL 2 BASIC12.65□□□□□ -0.39
BSNQ9UPA5 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC12.65□□□□□ -0.39
BSNQ9UPA5 AP006248.1-201ENST00000610471 67 ntBASIC12.65□□□□□ -0.39
BSNQ9UPA5 AC026120.2-201ENST00000617239 309 ntBASIC12.65□□□□□ -0.39
BSNQ9UPA5 AL512324.3-201ENST00000619383 882 ntBASIC12.65□□□□□ -0.39
BSNQ9UPA5 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
BSNQ9UPA5 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.65□□□□□ -0.39
BSNQ9UPA5 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.39
BSNQ9UPA5 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
BSNQ9UPA5 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BSNQ9UPA5 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
BSNQ9UPA5 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.64□□□□□ -0.39
BSNQ9UPA5 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
BSNQ9UPA5 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BSNQ9UPA5 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
BSNQ9UPA5 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
BSNQ9UPA5 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC12.64□□□□□ -0.39
BSNQ9UPA5 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
BSNQ9UPA5 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
BSNQ9UPA5 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC12.64□□□□□ -0.39
BSNQ9UPA5 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
BSNQ9UPA5 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
BSNQ9UPA5 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
BSNQ9UPA5 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC12.64□□□□□ -0.39
BSNQ9UPA5 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC12.64□□□□□ -0.39
BSNQ9UPA5 AL031673.1-201ENST00000611460 466 ntBASIC12.64□□□□□ -0.39
BSNQ9UPA5 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC12.64□□□□□ -0.39
BSNQ9UPA5 AC048382.6-201ENST00000621980 1223 ntBASIC12.64□□□□□ -0.39
BSNQ9UPA5 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BSNQ9UPA5 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BSNQ9UPA5 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
BSNQ9UPA5 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
BSNQ9UPA5 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BSNQ9UPA5 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BSNQ9UPA5 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BSNQ9UPA5 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC12.64□□□□□ -0.39
BSNQ9UPA5 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.64□□□□□ -0.39
BSNQ9UPA5 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
BSNQ9UPA5 HNRNPA1P21-201ENST00000424115 961 ntBASIC12.64□□□□□ -0.39
BSNQ9UPA5 TMA16-204ENST00000508268 608 ntTSL 2 BASIC12.64□□□□□ -0.39
BSNQ9UPA5 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC12.64□□□□□ -0.39
BSNQ9UPA5 KF455155.1-201ENST00000604493 303 ntBASIC12.64□□□□□ -0.39
BSNQ9UPA5 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
BSNQ9UPA5 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms