Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPC1L1Q9UHC9 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPC1L1Q9UHC9 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPC1L1Q9UHC9 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
NPC1L1Q9UHC9 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPC1L1Q9UHC9 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
NPC1L1Q9UHC9 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
NPC1L1Q9UHC9 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPC1L1Q9UHC9 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPC1L1Q9UHC9 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
NPC1L1Q9UHC9 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
NPC1L1Q9UHC9 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPC1L1Q9UHC9 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPC1L1Q9UHC9 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPC1L1Q9UHC9 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC19.29■□□□□ 0.68
NPC1L1Q9UHC9 AL133466.1-201ENST00000447582 150 ntBASIC19.29■□□□□ 0.68
NPC1L1Q9UHC9 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
NPC1L1Q9UHC9 FGFR3P5-201ENST00000564496 886 ntBASIC19.29■□□□□ 0.68
NPC1L1Q9UHC9 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC19.29■□□□□ 0.68
NPC1L1Q9UHC9 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
NPC1L1Q9UHC9 AL133467.4-201ENST00000602953 725 ntBASIC19.29■□□□□ 0.68
NPC1L1Q9UHC9 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC19.29■□□□□ 0.68
NPC1L1Q9UHC9 PKD1P1-201ENST00000458669 6805 ntBASIC19.29■□□□□ 0.68
NPC1L1Q9UHC9 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
NPC1L1Q9UHC9 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPC1L1Q9UHC9 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC19.28■□□□□ 0.68
NPC1L1Q9UHC9 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPC1L1Q9UHC9 AL928921.2-201ENST00000641325 2442 ntBASIC19.28■□□□□ 0.68
NPC1L1Q9UHC9 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
NPC1L1Q9UHC9 GOLGA8EP-201ENST00000530246 1959 ntBASIC19.28■□□□□ 0.68
NPC1L1Q9UHC9 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPC1L1Q9UHC9 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC19.28■□□□□ 0.68
NPC1L1Q9UHC9 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPC1L1Q9UHC9 F11R-206ENST00000621309 4770 ntTSL 5 BASIC19.28■□□□□ 0.68
NPC1L1Q9UHC9 MARK2P16-201ENST00000605714 1723 ntBASIC19.28■□□□□ 0.68
NPC1L1Q9UHC9 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
NPC1L1Q9UHC9 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC19.28■□□□□ 0.68
NPC1L1Q9UHC9 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
NPC1L1Q9UHC9 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPC1L1Q9UHC9 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPC1L1Q9UHC9 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NPC1L1Q9UHC9 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPC1L1Q9UHC9 RN7SL769P-201ENST00000469386 295 ntBASIC19.28■□□□□ 0.68
NPC1L1Q9UHC9 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC19.28■□□□□ 0.68
NPC1L1Q9UHC9 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC19.28■□□□□ 0.68
NPC1L1Q9UHC9 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC19.28■□□□□ 0.68
NPC1L1Q9UHC9 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC19.28■□□□□ 0.68
NPC1L1Q9UHC9 AC106872.11-201ENST00000605838 421 ntBASIC19.28■□□□□ 0.68
NPC1L1Q9UHC9 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NPC1L1Q9UHC9 AC009145.4-201ENST00000625119 1294 ntBASIC19.28■□□□□ 0.68
NPC1L1Q9UHC9 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPC1L1Q9UHC9 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPC1L1Q9UHC9 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPC1L1Q9UHC9 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NPC1L1Q9UHC9 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC19.27■□□□□ 0.68
NPC1L1Q9UHC9 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
NPC1L1Q9UHC9 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
NPC1L1Q9UHC9 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC19.27■□□□□ 0.68
NPC1L1Q9UHC9 TBC1D3J-201ENST00000620719 1426 ntBASIC19.27■□□□□ 0.68
NPC1L1Q9UHC9 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NPC1L1Q9UHC9 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NPC1L1Q9UHC9 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC19.27■□□□□ 0.68
NPC1L1Q9UHC9 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
NPC1L1Q9UHC9 AC138932.1-201ENST00000534164 6830 ntBASIC19.27■□□□□ 0.68
NPC1L1Q9UHC9 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
NPC1L1Q9UHC9 AC068760.1-201ENST00000493579 1953 ntBASIC19.27■□□□□ 0.68
NPC1L1Q9UHC9 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NPC1L1Q9UHC9 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NPC1L1Q9UHC9 AC006987.1-201ENST00000413610 527 ntBASIC19.27■□□□□ 0.68
NPC1L1Q9UHC9 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC19.27■□□□□ 0.68
NPC1L1Q9UHC9 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC19.27■□□□□ 0.68
NPC1L1Q9UHC9 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC19.27■□□□□ 0.68
NPC1L1Q9UHC9 AC234782.1-201ENST00000451950 919 ntBASIC19.27■□□□□ 0.68
NPC1L1Q9UHC9 FTH1P22-201ENST00000456305 520 ntBASIC19.27■□□□□ 0.68
NPC1L1Q9UHC9 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC19.27■□□□□ 0.68
NPC1L1Q9UHC9 AC008723.1-201ENST00000506922 207 ntBASIC19.27■□□□□ 0.68
NPC1L1Q9UHC9 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
NPC1L1Q9UHC9 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC19.27■□□□□ 0.68
NPC1L1Q9UHC9 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NPC1L1Q9UHC9 KRT18P8-201ENST00000581937 1246 ntBASIC19.27■□□□□ 0.68
NPC1L1Q9UHC9 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NPC1L1Q9UHC9 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NPC1L1Q9UHC9 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NPC1L1Q9UHC9 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NPC1L1Q9UHC9 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.67
NPC1L1Q9UHC9 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
NPC1L1Q9UHC9 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NPC1L1Q9UHC9 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NPC1L1Q9UHC9 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC19.27■□□□□ 0.67
NPC1L1Q9UHC9 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
NPC1L1Q9UHC9 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC19.27■□□□□ 0.67
NPC1L1Q9UHC9 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
NPC1L1Q9UHC9 SARS-202ENST00000369923 1882 ntTSL 5 BASIC19.26■□□□□ 0.67
NPC1L1Q9UHC9 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPC1L1Q9UHC9 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPC1L1Q9UHC9 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPC1L1Q9UHC9 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPC1L1Q9UHC9 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC19.26■□□□□ 0.67
NPC1L1Q9UHC9 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NPC1L1Q9UHC9 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms