Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 AC026748.1-201ENST00000624349 3251 ntBASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 MBP-201ENST00000354542 575 ntTSL 2 BASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 AL583805.1-201ENST00000391389 531 ntBASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 OR8T1P-201ENST00000421347 918 ntBASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 FTH1P22-201ENST00000456305 520 ntBASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 RN7SL277P-201ENST00000481521 288 ntBASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 MRPL22P1-201ENST00000505398 616 ntBASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 AL591471.1-201ENST00000621855 229 ntBASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 SNX1-214ENST00000625244 324 ntTSL 5 BASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 INTS4P1-203ENST00000641008 3683 ntBASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 U62317.3-201ENST00000608319 855 ntBASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 BAP1-211ENST00000615113 489 ntBASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 AC009145.4-201ENST00000625119 1294 ntBASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 AC016397.2-201ENST00000624848 1985 ntBASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 AC006480.2-201ENST00000609770 1337 ntBASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 HR-201ENST00000312841 5351 ntTSL 5 BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 C1R-202ENST00000536053 2347 ntTSL 2 BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 AC239868.1-201ENST00000369385 493 ntBASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 MAGEA5-201ENST00000446757 942 ntBASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 RHEB-207ENST00000496004 744 ntTSL 2 BASIC12.85□□□□□ -0.35
KIAA1549Q9HCM3 IQSEC3P1-201ENST00000538799 536 ntBASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms