Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 CU639417.3-201ENST00000624240 1404 ntBASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 ANKRD19P-201ENST00000338192 862 ntBASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 AL035414.1-201ENST00000451327 857 ntBASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 AP006547.1-201ENST00000563435 692 ntBASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 Z98259.2-201ENST00000641583 609 ntBASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
RSPO3Q9BXY4 TCAF1P1-201ENST00000414990 2232 ntBASIC13.33□□□□□ -0.27
RSPO3Q9BXY4 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
RSPO3Q9BXY4 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
RSPO3Q9BXY4 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.33□□□□□ -0.27
RSPO3Q9BXY4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
RSPO3Q9BXY4 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.33□□□□□ -0.27
RSPO3Q9BXY4 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
RSPO3Q9BXY4 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
RSPO3Q9BXY4 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 GOLGA8EP-201ENST00000530246 1959 ntBASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 DUX4L46-201ENST00000566845 751 ntBASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RSPO3Q9BXY4 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms