Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
TRAF4Q9BUZ4 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 AC006001.1-201ENST00000325130 474 ntBASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 FAM197Y7-201ENST00000432892 766 ntBASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 AC108725.1-201ENST00000495472 409 ntBASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 RN7SL560P-201ENST00000577943 264 ntBASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 MIR6787-201ENST00000616675 61 ntBASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAF4Q9BUZ4 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 AL133338.1-201ENST00000565695 1517 ntBASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 AC016397.2-201ENST00000624848 1985 ntBASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 RPL13AP20-201ENST00000459725 609 ntBASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRAF4Q9BUZ4 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms