Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.96■□□□□ 0.31
SLF1Q9BQI6 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLF1Q9BQI6 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
SLF1Q9BQI6 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLF1Q9BQI6 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLF1Q9BQI6 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC16.96■□□□□ 0.31
SLF1Q9BQI6 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.96■□□□□ 0.31
SLF1Q9BQI6 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.96■□□□□ 0.31
SLF1Q9BQI6 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.96■□□□□ 0.31
SLF1Q9BQI6 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SLF1Q9BQI6 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.96■□□□□ 0.31
SLF1Q9BQI6 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SLF1Q9BQI6 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.96■□□□□ 0.31
SLF1Q9BQI6 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLF1Q9BQI6 AC117489.1-201ENST00000625169 3217 ntBASIC16.96■□□□□ 0.31
SLF1Q9BQI6 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLF1Q9BQI6 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
SLF1Q9BQI6 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLF1Q9BQI6 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLF1Q9BQI6 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC16.96■□□□□ 0.31
SLF1Q9BQI6 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLF1Q9BQI6 TMEM198B-204ENST00000484016 896 ntBASIC16.96■□□□□ 0.31
SLF1Q9BQI6 PRKXP1-201ENST00000561423 1122 ntBASIC16.96■□□□□ 0.31
SLF1Q9BQI6 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLF1Q9BQI6 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC16.96■□□□□ 0.31
SLF1Q9BQI6 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.96■□□□□ 0.31
SLF1Q9BQI6 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC16.96■□□□□ 0.31
SLF1Q9BQI6 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC16.96■□□□□ 0.31
SLF1Q9BQI6 AL353726.2-201ENST00000623259 884 ntBASIC16.96■□□□□ 0.31
SLF1Q9BQI6 AC006453.1-201ENST00000636037 1257 ntBASIC16.96■□□□□ 0.31
SLF1Q9BQI6 AC128714.1-201ENST00000637035 887 ntBASIC16.96■□□□□ 0.31
SLF1Q9BQI6 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLF1Q9BQI6 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SLF1Q9BQI6 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLF1Q9BQI6 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLF1Q9BQI6 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.96■□□□□ 0.31
SLF1Q9BQI6 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLF1Q9BQI6 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.96■□□□□ 0.31
SLF1Q9BQI6 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLF1Q9BQI6 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLF1Q9BQI6 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLF1Q9BQI6 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLF1Q9BQI6 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLF1Q9BQI6 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.96■□□□□ 0.31
SLF1Q9BQI6 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.96■□□□□ 0.31
SLF1Q9BQI6 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLF1Q9BQI6 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLF1Q9BQI6 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SLF1Q9BQI6 STK26-204ENST00000481105 1835 ntTSL 2 BASIC16.96■□□□□ 0.3
SLF1Q9BQI6 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.3
SLF1Q9BQI6 AC018629.1-201ENST00000623381 1736 ntBASIC16.96■□□□□ 0.3
SLF1Q9BQI6 AC009093.10-201ENST00000641956 1442 ntBASIC16.96■□□□□ 0.3
SLF1Q9BQI6 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SLF1Q9BQI6 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLF1Q9BQI6 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLF1Q9BQI6 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLF1Q9BQI6 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLF1Q9BQI6 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.95■□□□□ 0.3
SLF1Q9BQI6 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SLF1Q9BQI6 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SLF1Q9BQI6 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.95■□□□□ 0.3
SLF1Q9BQI6 KRT18P36-201ENST00000411618 1276 ntBASIC16.95■□□□□ 0.3
SLF1Q9BQI6 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLF1Q9BQI6 XBP1P1-201ENST00000436573 652 ntBASIC16.95■□□□□ 0.3
SLF1Q9BQI6 FTLP1-201ENST00000449155 526 ntBASIC16.95■□□□□ 0.3
SLF1Q9BQI6 CEP164P1-201ENST00000455142 418 ntBASIC16.95■□□□□ 0.3
SLF1Q9BQI6 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLF1Q9BQI6 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC16.95■□□□□ 0.3
SLF1Q9BQI6 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLF1Q9BQI6 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SLF1Q9BQI6 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.95■□□□□ 0.3
SLF1Q9BQI6 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.95■□□□□ 0.3
SLF1Q9BQI6 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC16.95■□□□□ 0.3
SLF1Q9BQI6 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC16.95■□□□□ 0.3
SLF1Q9BQI6 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC16.95■□□□□ 0.3
SLF1Q9BQI6 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLF1Q9BQI6 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLF1Q9BQI6 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SLF1Q9BQI6 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLF1Q9BQI6 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLF1Q9BQI6 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.95■□□□□ 0.3
SLF1Q9BQI6 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
SLF1Q9BQI6 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLF1Q9BQI6 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLF1Q9BQI6 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SLF1Q9BQI6 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLF1Q9BQI6 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLF1Q9BQI6 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC16.95■□□□□ 0.3
SLF1Q9BQI6 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SLF1Q9BQI6 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLF1Q9BQI6 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLF1Q9BQI6 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLF1Q9BQI6 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLF1Q9BQI6 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.94■□□□□ 0.3
SLF1Q9BQI6 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.94■□□□□ 0.3
SLF1Q9BQI6 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLF1Q9BQI6 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLF1Q9BQI6 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLF1Q9BQI6 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.94■□□□□ 0.3
SLF1Q9BQI6 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms