Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-CQ95604 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-CQ95604 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
HLA-CQ95604 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
HLA-CQ95604 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-CQ95604 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-CQ95604 AC010491.1-201ENST00000563101 2797 ntBASIC14.84□□□□□ -0.03
HLA-CQ95604 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-CQ95604 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.84□□□□□ -0.03
HLA-CQ95604 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-CQ95604 AC092573.1-201ENST00000433054 884 ntBASIC14.84□□□□□ -0.03
HLA-CQ95604 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC14.84□□□□□ -0.03
HLA-CQ95604 AL356000.1-201ENST00000441073 1238 ntBASIC14.84□□□□□ -0.03
HLA-CQ95604 KRT19P4-201ENST00000443208 943 ntBASIC14.84□□□□□ -0.03
HLA-CQ95604 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-CQ95604 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-CQ95604 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.84□□□□□ -0.03
HLA-CQ95604 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC14.84□□□□□ -0.03
HLA-CQ95604 ALG1L15P-201ENST00000482834 794 ntBASIC14.84□□□□□ -0.03
HLA-CQ95604 TSPAN5-202ENST00000505184 1191 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-CQ95604 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
HLA-CQ95604 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC14.84□□□□□ -0.03
HLA-CQ95604 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC14.84□□□□□ -0.03
HLA-CQ95604 AC079414.2-201ENST00000567157 1104 ntBASIC14.84□□□□□ -0.03
HLA-CQ95604 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC14.84□□□□□ -0.03
HLA-CQ95604 AL450487.2-201ENST00000615934 407 ntBASIC14.84□□□□□ -0.03
HLA-CQ95604 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-CQ95604 TMEM14EP-202ENST00000639378 1296 ntBASIC14.84□□□□□ -0.03
HLA-CQ95604 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-CQ95604 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-CQ95604 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-CQ95604 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-CQ95604 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-CQ95604 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-CQ95604 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-CQ95604 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-CQ95604 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.84□□□□□ -0.03
HLA-CQ95604 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.84□□□□□ -0.03
HLA-CQ95604 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-CQ95604 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-CQ95604 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.84□□□□□ -0.03
HLA-CQ95604 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.84□□□□□ -0.03
HLA-CQ95604 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HLA-CQ95604 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.84□□□□□ -0.03
HLA-CQ95604 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-CQ95604 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.83□□□□□ -0.03
HLA-CQ95604 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-CQ95604 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-CQ95604 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-CQ95604 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-CQ95604 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
HLA-CQ95604 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.83□□□□□ -0.03
HLA-CQ95604 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-CQ95604 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-CQ95604 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-CQ95604 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-CQ95604 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.83□□□□□ -0.03
HLA-CQ95604 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
HLA-CQ95604 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-CQ95604 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HLA-CQ95604 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.83□□□□□ -0.04
HLA-CQ95604 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
HLA-CQ95604 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.83□□□□□ -0.04
HLA-CQ95604 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-CQ95604 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
HLA-CQ95604 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
HLA-CQ95604 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-CQ95604 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-CQ95604 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-CQ95604 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.83□□□□□ -0.04
HLA-CQ95604 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-CQ95604 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-CQ95604 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
HLA-CQ95604 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
HLA-CQ95604 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC14.83□□□□□ -0.04
HLA-CQ95604 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-CQ95604 MIR611-201ENST00000384869 67 ntBASIC14.83□□□□□ -0.04
HLA-CQ95604 ABCD1P4-201ENST00000399687 604 ntBASIC14.83□□□□□ -0.04
HLA-CQ95604 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-CQ95604 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-CQ95604 AC053503.3-201ENST00000448375 114 ntBASIC14.83□□□□□ -0.04
HLA-CQ95604 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC14.83□□□□□ -0.04
HLA-CQ95604 AC025186.1-201ENST00000478174 870 ntBASIC14.83□□□□□ -0.04
HLA-CQ95604 USP9YP2-201ENST00000504503 1000 ntBASIC14.83□□□□□ -0.04
HLA-CQ95604 USP9YP1-201ENST00000513521 1002 ntBASIC14.83□□□□□ -0.04
HLA-CQ95604 AC005740.1-201ENST00000515639 522 ntBASIC14.83□□□□□ -0.04
HLA-CQ95604 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-CQ95604 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-CQ95604 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-CQ95604 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC14.83□□□□□ -0.04
HLA-CQ95604 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
HLA-CQ95604 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC14.83□□□□□ -0.04
HLA-CQ95604 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC14.83□□□□□ -0.04
HLA-CQ95604 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.83□□□□□ -0.04
HLA-CQ95604 AL136982.5-201ENST00000605222 294 ntBASIC14.83□□□□□ -0.04
HLA-CQ95604 PSME2-217ENST00000615264 874 ntTSL 5 BASIC14.83□□□□□ -0.04
HLA-CQ95604 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC14.83□□□□□ -0.04
HLA-CQ95604 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-CQ95604 PSME2-218ENST00000630027 185 ntTSL 3 BASIC14.83□□□□□ -0.04
HLA-CQ95604 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms