Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SHC3Q92529 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SHC3Q92529 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SHC3Q92529 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.07
SHC3Q92529 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC15.52■□□□□ 0.07
SHC3Q92529 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SHC3Q92529 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
SHC3Q92529 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SHC3Q92529 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SHC3Q92529 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.51■□□□□ 0.07
SHC3Q92529 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHC3Q92529 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
SHC3Q92529 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC15.51■□□□□ 0.07
SHC3Q92529 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SHC3Q92529 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.51■□□□□ 0.07
SHC3Q92529 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
SHC3Q92529 CYP4F23P-201ENST00000593402 1579 ntBASIC15.51■□□□□ 0.07
SHC3Q92529 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHC3Q92529 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHC3Q92529 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHC3Q92529 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SHC3Q92529 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.51■□□□□ 0.07
SHC3Q92529 RNA5SP412-201ENST00000516234 123 ntBASIC15.51■□□□□ 0.07
SHC3Q92529 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.51■□□□□ 0.07
SHC3Q92529 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.51■□□□□ 0.07
SHC3Q92529 AL160314.3-201ENST00000556041 767 ntBASIC15.51■□□□□ 0.07
SHC3Q92529 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHC3Q92529 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.51■□□□□ 0.07
SHC3Q92529 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.51■□□□□ 0.07
SHC3Q92529 AC017083.2-201ENST00000608069 979 ntBASIC15.51■□□□□ 0.07
SHC3Q92529 MIR6805-201ENST00000615055 62 ntBASIC15.51■□□□□ 0.07
SHC3Q92529 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.51■□□□□ 0.07
SHC3Q92529 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHC3Q92529 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SHC3Q92529 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHC3Q92529 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHC3Q92529 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHC3Q92529 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHC3Q92529 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.51■□□□□ 0.07
SHC3Q92529 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC15.51■□□□□ 0.07
SHC3Q92529 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHC3Q92529 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHC3Q92529 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
SHC3Q92529 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.51■□□□□ 0.07
SHC3Q92529 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.51■□□□□ 0.07
SHC3Q92529 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHC3Q92529 AC144522.1-201ENST00000625111 1658 ntBASIC15.51■□□□□ 0.07
SHC3Q92529 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SHC3Q92529 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHC3Q92529 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHC3Q92529 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SHC3Q92529 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHC3Q92529 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
SHC3Q92529 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
SHC3Q92529 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHC3Q92529 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SHC3Q92529 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHC3Q92529 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.5■□□□□ 0.07
SHC3Q92529 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
SHC3Q92529 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SHC3Q92529 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
SHC3Q92529 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.5■□□□□ 0.07
SHC3Q92529 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC15.5■□□□□ 0.07
SHC3Q92529 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHC3Q92529 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.5■□□□□ 0.07
SHC3Q92529 MIR658-201ENST00000385210 100 ntBASIC15.5■□□□□ 0.07
SHC3Q92529 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.5■□□□□ 0.07
SHC3Q92529 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SHC3Q92529 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
SHC3Q92529 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.5■□□□□ 0.07
SHC3Q92529 AC006122.1-201ENST00000493323 440 ntBASIC15.5■□□□□ 0.07
SHC3Q92529 RPSAP36-202ENST00000494591 1261 ntBASIC15.5■□□□□ 0.07
SHC3Q92529 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SHC3Q92529 IGHV3-71-201ENST00000523324 359 ntBASIC15.5■□□□□ 0.07
SHC3Q92529 AC003686.1-201ENST00000550956 1034 ntBASIC15.5■□□□□ 0.07
SHC3Q92529 AC005962.1-201ENST00000584100 773 ntBASIC15.5■□□□□ 0.07
SHC3Q92529 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC15.5■□□□□ 0.07
SHC3Q92529 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.5■□□□□ 0.07
SHC3Q92529 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.5■□□□□ 0.07
SHC3Q92529 AC009542.2-202ENST00000619004 1067 ntBASIC15.5■□□□□ 0.07
SHC3Q92529 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC15.5■□□□□ 0.07
SHC3Q92529 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC15.5■□□□□ 0.07
SHC3Q92529 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SHC3Q92529 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
SHC3Q92529 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC15.5■□□□□ 0.07
SHC3Q92529 AC010327.5-201ENST00000586923 3061 ntBASIC15.5■□□□□ 0.07
SHC3Q92529 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHC3Q92529 LAP3P2-201ENST00000454686 1454 ntBASIC15.5■□□□□ 0.07
SHC3Q92529 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.5■□□□□ 0.07
SHC3Q92529 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.5■□□□□ 0.07
SHC3Q92529 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC15.5■□□□□ 0.07
SHC3Q92529 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHC3Q92529 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SHC3Q92529 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SHC3Q92529 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SHC3Q92529 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.5■□□□□ 0.07
SHC3Q92529 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHC3Q92529 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SHC3Q92529 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHC3Q92529 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms