Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 AC016694.1-201ENST00000434179 700 ntBASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 PUDPP3-201ENST00000445368 636 ntBASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 USP32P1-208ENST00000506594 1164 ntBASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 AC103988.2-201ENST00000561804 725 ntBASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 AL596325.1-201ENST00000563991 1082 ntBASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 BX088702.1-201ENST00000610784 235 ntBASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 CU639417.3-201ENST00000624240 1404 ntBASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 AC009093.2-202ENST00000620513 2079 ntBASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 AC092933.1-201ENST00000393644 945 ntBASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 FAM197Y7-201ENST00000432892 766 ntBASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 FTH1P14-201ENST00000482930 551 ntBASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 ALG3P1-201ENST00000508806 1114 ntBASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 AC132938.2-201ENST00000579188 680 ntBASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 BTNL10-201ENST00000595971 695 ntBASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 AC138951.2-201ENST00000623455 1161 ntBASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 AL591163.1-201ENST00000641757 987 ntBASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF3IP1Q8TDR0 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF3IP1Q8TDR0 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF3IP1Q8TDR0 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAF3IP1Q8TDR0 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF3IP1Q8TDR0 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF3IP1Q8TDR0 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF3IP1Q8TDR0 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TRAF3IP1Q8TDR0 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAF3IP1Q8TDR0 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF3IP1Q8TDR0 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAF3IP1Q8TDR0 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms