Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMC1Q8TDI8 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMC1Q8TDI8 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TMC1Q8TDI8 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC20.3■□□□□ 0.84
TMC1Q8TDI8 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TMC1Q8TDI8 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMC1Q8TDI8 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC20.3■□□□□ 0.84
TMC1Q8TDI8 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
TMC1Q8TDI8 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TMC1Q8TDI8 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMC1Q8TDI8 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC20.3■□□□□ 0.84
TMC1Q8TDI8 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TMC1Q8TDI8 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
TMC1Q8TDI8 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMC1Q8TDI8 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TMC1Q8TDI8 AC091046.1-201ENST00000331871 207 ntBASIC20.3■□□□□ 0.84
TMC1Q8TDI8 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMC1Q8TDI8 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC20.3■□□□□ 0.84
TMC1Q8TDI8 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC20.3■□□□□ 0.84
TMC1Q8TDI8 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC20.3■□□□□ 0.84
TMC1Q8TDI8 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC20.3■□□□□ 0.84
TMC1Q8TDI8 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC20.3■□□□□ 0.84
TMC1Q8TDI8 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC20.3■□□□□ 0.84
TMC1Q8TDI8 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC20.3■□□□□ 0.84
TMC1Q8TDI8 AC134698.3-201ENST00000523880 214 ntBASIC20.3■□□□□ 0.84
TMC1Q8TDI8 AC090857.1-201ENST00000527400 390 ntBASIC20.3■□□□□ 0.84
TMC1Q8TDI8 AL161670.2-201ENST00000557650 1227 ntBASIC20.3■□□□□ 0.84
TMC1Q8TDI8 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC20.3■□□□□ 0.84
TMC1Q8TDI8 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TMC1Q8TDI8 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC20.3■□□□□ 0.84
TMC1Q8TDI8 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMC1Q8TDI8 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC20.3■□□□□ 0.84
TMC1Q8TDI8 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
TMC1Q8TDI8 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMC1Q8TDI8 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMC1Q8TDI8 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TMC1Q8TDI8 AC005089.1-201ENST00000619486 2241 ntBASIC20.3■□□□□ 0.84
TMC1Q8TDI8 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
TMC1Q8TDI8 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TMC1Q8TDI8 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMC1Q8TDI8 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TMC1Q8TDI8 MVK-214ENST00000629016 1591 ntTSL 5 BASIC20.29■□□□□ 0.84
TMC1Q8TDI8 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC20.29■□□□□ 0.84
TMC1Q8TDI8 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC20.29■□□□□ 0.84
TMC1Q8TDI8 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMC1Q8TDI8 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
TMC1Q8TDI8 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMC1Q8TDI8 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC20.29■□□□□ 0.84
TMC1Q8TDI8 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMC1Q8TDI8 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TMC1Q8TDI8 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TMC1Q8TDI8 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMC1Q8TDI8 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMC1Q8TDI8 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMC1Q8TDI8 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC20.29■□□□□ 0.84
TMC1Q8TDI8 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMC1Q8TDI8 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMC1Q8TDI8 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TMC1Q8TDI8 ISCA2P1-201ENST00000425548 448 ntBASIC20.29■□□□□ 0.84
TMC1Q8TDI8 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC20.29■□□□□ 0.84
TMC1Q8TDI8 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC20.29■□□□□ 0.84
TMC1Q8TDI8 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC20.29■□□□□ 0.84
TMC1Q8TDI8 FOS-206ENST00000555347 1280 ntTSL 2 BASIC20.29■□□□□ 0.84
TMC1Q8TDI8 RBM8B-201ENST00000555532 525 ntBASIC20.29■□□□□ 0.84
TMC1Q8TDI8 PAM16-211ENST00000575848 518 ntTSL 3 BASIC20.29■□□□□ 0.84
TMC1Q8TDI8 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TMC1Q8TDI8 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC20.29■□□□□ 0.84
TMC1Q8TDI8 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMC1Q8TDI8 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC20.29■□□□□ 0.84
TMC1Q8TDI8 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMC1Q8TDI8 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMC1Q8TDI8 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMC1Q8TDI8 RAN-210ENST00000541630 1475 ntTSL 2 BASIC20.29■□□□□ 0.84
TMC1Q8TDI8 KRT8P19-201ENST00000551916 1455 ntBASIC20.29■□□□□ 0.84
TMC1Q8TDI8 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMC1Q8TDI8 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TMC1Q8TDI8 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMC1Q8TDI8 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC20.28■□□□□ 0.84
TMC1Q8TDI8 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TMC1Q8TDI8 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TMC1Q8TDI8 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMC1Q8TDI8 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMC1Q8TDI8 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMC1Q8TDI8 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMC1Q8TDI8 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TMC1Q8TDI8 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMC1Q8TDI8 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC20.28■□□□□ 0.84
TMC1Q8TDI8 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMC1Q8TDI8 HLA-DQB2-229ENST00000411527 1059 ntBASIC20.28■□□□□ 0.84
TMC1Q8TDI8 AC078875.1-201ENST00000431907 724 ntBASIC20.28■□□□□ 0.84
TMC1Q8TDI8 AL596276.2-201ENST00000447525 331 ntBASIC20.28■□□□□ 0.84
TMC1Q8TDI8 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC20.28■□□□□ 0.84
TMC1Q8TDI8 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC20.28■□□□□ 0.84
TMC1Q8TDI8 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC20.28■□□□□ 0.84
TMC1Q8TDI8 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC20.28■□□□□ 0.84
TMC1Q8TDI8 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC20.28■□□□□ 0.84
TMC1Q8TDI8 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TMC1Q8TDI8 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TMC1Q8TDI8 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC20.28■□□□□ 0.84
TMC1Q8TDI8 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms