Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.51□□□□□ -0.09
RFWD2Q8NHY2 TREML5P-201ENST00000421694 576 ntBASIC14.51□□□□□ -0.09
RFWD2Q8NHY2 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.51□□□□□ -0.09
RFWD2Q8NHY2 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RFWD2Q8NHY2 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.51□□□□□ -0.09
RFWD2Q8NHY2 RN7SL618P-201ENST00000477850 296 ntBASIC14.51□□□□□ -0.09
RFWD2Q8NHY2 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RFWD2Q8NHY2 AC067863.1-201ENST00000494933 530 ntBASIC14.51□□□□□ -0.09
RFWD2Q8NHY2 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
RFWD2Q8NHY2 SDHAP3-202ENST00000515467 728 ntBASIC14.51□□□□□ -0.09
RFWD2Q8NHY2 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.51□□□□□ -0.09
RFWD2Q8NHY2 DUX4L47-201ENST00000566374 394 ntBASIC14.51□□□□□ -0.09
RFWD2Q8NHY2 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RFWD2Q8NHY2 TEX28P1-201ENST00000613479 1221 ntBASIC14.51□□□□□ -0.09
RFWD2Q8NHY2 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
RFWD2Q8NHY2 AL138828.2-201ENST00000615812 383 ntBASIC14.51□□□□□ -0.09
RFWD2Q8NHY2 TEX28P2-201ENST00000617764 1221 ntBASIC14.51□□□□□ -0.09
RFWD2Q8NHY2 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.51□□□□□ -0.09
RFWD2Q8NHY2 AL158212.4-201ENST00000624062 1286 ntBASIC14.51□□□□□ -0.09
RFWD2Q8NHY2 AC073592.8-201ENST00000624126 511 ntBASIC14.51□□□□□ -0.09
RFWD2Q8NHY2 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.51□□□□□ -0.09
RFWD2Q8NHY2 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.51□□□□□ -0.09
RFWD2Q8NHY2 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFWD2Q8NHY2 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFWD2Q8NHY2 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
RFWD2Q8NHY2 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.51□□□□□ -0.09
RFWD2Q8NHY2 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.51□□□□□ -0.09
RFWD2Q8NHY2 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFWD2Q8NHY2 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFWD2Q8NHY2 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFWD2Q8NHY2 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFWD2Q8NHY2 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
RFWD2Q8NHY2 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFWD2Q8NHY2 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC14.51□□□□□ -0.09
RFWD2Q8NHY2 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RFWD2Q8NHY2 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFWD2Q8NHY2 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
RFWD2Q8NHY2 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
RFWD2Q8NHY2 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.51□□□□□ -0.09
RFWD2Q8NHY2 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFWD2Q8NHY2 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RFWD2Q8NHY2 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFWD2Q8NHY2 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.51□□□□□ -0.09
RFWD2Q8NHY2 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFWD2Q8NHY2 PCDHB18P-202ENST00000526308 3197 ntBASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 DRD5P1-201ENST00000456605 1438 ntBASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 AL445209.1-201ENST00000607269 3491 ntBASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 AGAP12P-201ENST00000585227 2359 ntBASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 MIR943-201ENST00000401286 94 ntBASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 AC026434.2-201ENST00000506094 1078 ntBASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms