Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 MRPL37P1-201ENST00000592451 1337 ntBASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SIMC1Q8NDZ2 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 CES1P1-201ENST00000421606 1704 ntBASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 AC099336.1-201ENST00000417053 1171 ntBASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 CD8B2-202ENST00000417670 633 ntBASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 AC022447.6-201ENST00000515522 438 ntBASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 C2orf69P2-201ENST00000562032 1123 ntBASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 RN7SL713P-201ENST00000582127 302 ntBASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SIMC1Q8NDZ2 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SIMC1Q8NDZ2 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.83□□□□□ -0.19
SIMC1Q8NDZ2 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SIMC1Q8NDZ2 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
SIMC1Q8NDZ2 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SIMC1Q8NDZ2 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
SIMC1Q8NDZ2 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SIMC1Q8NDZ2 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SIMC1Q8NDZ2 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 AC104989.1-201ENST00000519711 778 ntBASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 NOP2-211ENST00000540228 668 ntTSL 2 BASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 AP006547.1-201ENST00000563435 692 ntBASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms