Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC12.87□□□□□ -0.35
ZIC4Q8N9L1 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.87□□□□□ -0.35
ZIC4Q8N9L1 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZIC4Q8N9L1 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ZIC4Q8N9L1 AC005740.2-201ENST00000511085 419 ntBASIC12.87□□□□□ -0.35
ZIC4Q8N9L1 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZIC4Q8N9L1 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC12.87□□□□□ -0.35
ZIC4Q8N9L1 EMC4-209ENST00000559421 497 ntTSL 2 BASIC12.87□□□□□ -0.35
ZIC4Q8N9L1 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC12.87□□□□□ -0.35
ZIC4Q8N9L1 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC12.87□□□□□ -0.35
ZIC4Q8N9L1 AL451050.2-201ENST00000606967 682 ntBASIC12.87□□□□□ -0.35
ZIC4Q8N9L1 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
ZIC4Q8N9L1 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ZIC4Q8N9L1 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
ZIC4Q8N9L1 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC12.87□□□□□ -0.35
ZIC4Q8N9L1 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
ZIC4Q8N9L1 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZIC4Q8N9L1 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
ZIC4Q8N9L1 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZIC4Q8N9L1 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZIC4Q8N9L1 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZIC4Q8N9L1 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
ZIC4Q8N9L1 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ZIC4Q8N9L1 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.87□□□□□ -0.35
ZIC4Q8N9L1 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ZIC4Q8N9L1 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC12.87□□□□□ -0.35
ZIC4Q8N9L1 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
ZIC4Q8N9L1 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZIC4Q8N9L1 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZIC4Q8N9L1 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZIC4Q8N9L1 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 AL022313.4-201ENST00000562756 2046 ntBASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 AC018629.1-201ENST00000623381 1736 ntBASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 OR2R1P-201ENST00000441404 914 ntBASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 PACS1-203ENST00000524815 628 ntTSL 4 BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 PGAM1P5-201ENST00000548011 764 ntBASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 AC009779.1-201ENST00000551138 283 ntBASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 AL132994.2-201ENST00000603120 687 ntBASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 MIR6799-201ENST00000620297 69 ntBASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
ZIC4Q8N9L1 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms