Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 AL662890.1-201ENST00000396818 632 ntBASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 NKAIN1P1-201ENST00000435754 582 ntBASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 HIST2H2BB-201ENST00000449108 381 ntBASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 AC044849.1-201ENST00000519737 1188 ntBASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 AP003171.2-201ENST00000528208 925 ntBASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 AC005730.2-201ENST00000564549 1184 ntBASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 NDUFV2P1-201ENST00000596415 907 ntBASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 AC106872.11-201ENST00000605838 421 ntBASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 AC003102.2-201ENST00000589195 1469 ntBASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.39■□□□□ 0.06
CCDC33Q8N5R6 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC33Q8N5R6 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC33Q8N5R6 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
CCDC33Q8N5R6 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC33Q8N5R6 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC33Q8N5R6 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC33Q8N5R6 AC009093.2-202ENST00000620513 2079 ntBASIC15.39■□□□□ 0.05
CCDC33Q8N5R6 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC33Q8N5R6 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC33Q8N5R6 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.39■□□□□ 0.05
CCDC33Q8N5R6 AC011840.2-201ENST00000563063 1520 ntBASIC15.39■□□□□ 0.05
CCDC33Q8N5R6 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC33Q8N5R6 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC33Q8N5R6 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC33Q8N5R6 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CCDC33Q8N5R6 DEF8-202ENST00000418391 852 ntTSL 2 BASIC15.39■□□□□ 0.05
CCDC33Q8N5R6 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.39■□□□□ 0.05
CCDC33Q8N5R6 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC15.39■□□□□ 0.05
CCDC33Q8N5R6 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC33Q8N5R6 FOS-206ENST00000555347 1280 ntTSL 2 BASIC15.39■□□□□ 0.05
CCDC33Q8N5R6 AC079328.1-201ENST00000560358 952 ntBASIC15.39■□□□□ 0.05
CCDC33Q8N5R6 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC15.39■□□□□ 0.05
CCDC33Q8N5R6 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC15.39■□□□□ 0.05
CCDC33Q8N5R6 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC33Q8N5R6 AP001002.3-201ENST00000623482 206 ntBASIC15.39■□□□□ 0.05
CCDC33Q8N5R6 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC33Q8N5R6 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.39■□□□□ 0.05
CCDC33Q8N5R6 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CCDC33Q8N5R6 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC33Q8N5R6 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.39■□□□□ 0.05
CCDC33Q8N5R6 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.39■□□□□ 0.05
CCDC33Q8N5R6 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC33Q8N5R6 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC33Q8N5R6 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CCDC33Q8N5R6 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CCDC33Q8N5R6 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC33Q8N5R6 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC33Q8N5R6 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.38■□□□□ 0.05
CCDC33Q8N5R6 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.38■□□□□ 0.05
CCDC33Q8N5R6 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
CCDC33Q8N5R6 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC33Q8N5R6 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC33Q8N5R6 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
CCDC33Q8N5R6 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.38■□□□□ 0.05
CCDC33Q8N5R6 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC33Q8N5R6 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CCDC33Q8N5R6 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC33Q8N5R6 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC33Q8N5R6 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.38■□□□□ 0.05
CCDC33Q8N5R6 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms