Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCDC170Q8IYT3 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 AL022313.4-201ENST00000562756 2046 ntBASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 SLC6A6P1-201ENST00000413933 1850 ntBASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 BASP1P1-201ENST00000430708 665 ntBASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 AL161932.2-201ENST00000435436 679 ntBASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 FTLP10-202ENST00000505798 471 ntBASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 AC123567.1-201ENST00000548294 1261 ntBASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 NCLP1-201ENST00000445357 1963 ntBASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC170Q8IYT3 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC170Q8IYT3 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CCDC170Q8IYT3 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CCDC170Q8IYT3 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC170Q8IYT3 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CCDC170Q8IYT3 KRT18P28-201ENST00000453838 1332 ntBASIC15.71■□□□□ 0.11
CCDC170Q8IYT3 FKBP4P6-201ENST00000457486 1332 ntBASIC15.71■□□□□ 0.11
CCDC170Q8IYT3 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC170Q8IYT3 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC170Q8IYT3 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC170Q8IYT3 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC170Q8IYT3 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CCDC170Q8IYT3 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC170Q8IYT3 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC15.71■□□□□ 0.11
CCDC170Q8IYT3 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC170Q8IYT3 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC170Q8IYT3 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC170Q8IYT3 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CCDC170Q8IYT3 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC170Q8IYT3 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC170Q8IYT3 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC170Q8IYT3 AC005586.2-201ENST00000563946 837 ntBASIC15.71■□□□□ 0.11
CCDC170Q8IYT3 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC170Q8IYT3 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
CCDC170Q8IYT3 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC170Q8IYT3 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CCDC170Q8IYT3 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CCDC170Q8IYT3 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CCDC170Q8IYT3 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
CCDC170Q8IYT3 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms