Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.03■□□□□ -0
NPAS3Q8IXF0 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
NPAS3Q8IXF0 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.03■□□□□ -0
NPAS3Q8IXF0 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPAS3Q8IXF0 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.03■□□□□ -0
NPAS3Q8IXF0 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.03■□□□□ -0
NPAS3Q8IXF0 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
NPAS3Q8IXF0 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
NPAS3Q8IXF0 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.02■□□□□ -0
NPAS3Q8IXF0 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NPAS3Q8IXF0 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.02■□□□□ -0
NPAS3Q8IXF0 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.02■□□□□ -0
NPAS3Q8IXF0 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
NPAS3Q8IXF0 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.02■□□□□ -0
NPAS3Q8IXF0 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
NPAS3Q8IXF0 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NPAS3Q8IXF0 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC15.02■□□□□ -0
NPAS3Q8IXF0 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.02■□□□□ -0
NPAS3Q8IXF0 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
NPAS3Q8IXF0 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
NPAS3Q8IXF0 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.02■□□□□ -0
NPAS3Q8IXF0 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC15.02■□□□□ -0
NPAS3Q8IXF0 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC15.02■□□□□ -0
NPAS3Q8IXF0 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NPAS3Q8IXF0 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NPAS3Q8IXF0 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC15.02■□□□□ -0
NPAS3Q8IXF0 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC15.02■□□□□ -0
NPAS3Q8IXF0 AL354861.1-201ENST00000445213 355 ntBASIC15.02■□□□□ -0
NPAS3Q8IXF0 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC15.02■□□□□ -0
NPAS3Q8IXF0 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
NPAS3Q8IXF0 MTND2P7-201ENST00000521337 640 ntBASIC15.02■□□□□ -0
NPAS3Q8IXF0 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC15.02■□□□□ -0
NPAS3Q8IXF0 AC138701.2-201ENST00000553634 226 ntBASIC15.02■□□□□ -0
NPAS3Q8IXF0 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC15.02■□□□□ -0
NPAS3Q8IXF0 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC15.02■□□□□ -0
NPAS3Q8IXF0 AC005041.3-201ENST00000606287 649 ntBASIC15.02■□□□□ -0
NPAS3Q8IXF0 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC15.02■□□□□ -0
NPAS3Q8IXF0 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC15.02■□□□□ -0
NPAS3Q8IXF0 AC127024.7-201ENST00000625101 200 ntBASIC15.02■□□□□ -0
NPAS3Q8IXF0 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPAS3Q8IXF0 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.02□□□□□ -0.01
NPAS3Q8IXF0 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NPAS3Q8IXF0 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPAS3Q8IXF0 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NPAS3Q8IXF0 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
NPAS3Q8IXF0 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
NPAS3Q8IXF0 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.02□□□□□ -0.01
NPAS3Q8IXF0 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPAS3Q8IXF0 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPAS3Q8IXF0 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPAS3Q8IXF0 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPAS3Q8IXF0 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC15.02□□□□□ -0.01
NPAS3Q8IXF0 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.02□□□□□ -0.01
NPAS3Q8IXF0 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPAS3Q8IXF0 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPAS3Q8IXF0 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.02□□□□□ -0.01
NPAS3Q8IXF0 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS3Q8IXF0 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS3Q8IXF0 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS3Q8IXF0 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
NPAS3Q8IXF0 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.01□□□□□ -0.01
NPAS3Q8IXF0 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
NPAS3Q8IXF0 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS3Q8IXF0 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS3Q8IXF0 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS3Q8IXF0 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC15.01□□□□□ -0.01
NPAS3Q8IXF0 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS3Q8IXF0 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
NPAS3Q8IXF0 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS3Q8IXF0 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS3Q8IXF0 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS3Q8IXF0 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS3Q8IXF0 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
NPAS3Q8IXF0 IL9RP3-201ENST00000442856 1674 ntBASIC15.01□□□□□ -0.01
NPAS3Q8IXF0 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS3Q8IXF0 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS3Q8IXF0 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS3Q8IXF0 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
NPAS3Q8IXF0 AC073869.2-201ENST00000417338 1026 ntBASIC15.01□□□□□ -0.01
NPAS3Q8IXF0 AC092580.1-201ENST00000433998 658 ntBASIC15.01□□□□□ -0.01
NPAS3Q8IXF0 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC15.01□□□□□ -0.01
NPAS3Q8IXF0 AC027237.1-201ENST00000560942 655 ntBASIC15.01□□□□□ -0.01
NPAS3Q8IXF0 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC15.01□□□□□ -0.01
NPAS3Q8IXF0 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC15.01□□□□□ -0.01
NPAS3Q8IXF0 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC15.01□□□□□ -0.01
NPAS3Q8IXF0 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC15.01□□□□□ -0.01
NPAS3Q8IXF0 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS3Q8IXF0 AC015688.4-201ENST00000580780 1647 ntBASIC15.01□□□□□ -0.01
NPAS3Q8IXF0 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
NPAS3Q8IXF0 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS3Q8IXF0 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS3Q8IXF0 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS3Q8IXF0 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.01□□□□□ -0.01
NPAS3Q8IXF0 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.01□□□□□ -0.01
NPAS3Q8IXF0 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC15.01□□□□□ -0.01
NPAS3Q8IXF0 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS3Q8IXF0 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.01□□□□□ -0.01
NPAS3Q8IXF0 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
NPAS3Q8IXF0 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
NPAS3Q8IXF0 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms