Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 AL035414.1-201ENST00000451327 857 ntBASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 AC138649.2-201ENST00000615886 705 ntBASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 MRPL37P1-201ENST00000592451 1337 ntBASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 LINC00528-201ENST00000600723 2160 ntBASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 AC132192.2-201ENST00000596206 1147 ntBASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 AC009955.4-201ENST00000597192 544 ntBASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 AL451050.2-201ENST00000606967 682 ntBASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 BX088702.1-201ENST00000610784 235 ntBASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 AC027601.3-201ENST00000622907 509 ntBASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 AL162426.1-201ENST00000624141 743 ntBASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRIM48Q8IWZ4 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
TRIM48Q8IWZ4 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
TRIM48Q8IWZ4 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
TRIM48Q8IWZ4 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 AC117489.1-201ENST00000625169 3217 ntBASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms