Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RFWD3Q6PCD5 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFWD3Q6PCD5 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.27■□□□□ 0.04
RFWD3Q6PCD5 PUDPP3-201ENST00000445368 636 ntBASIC15.27■□□□□ 0.04
RFWD3Q6PCD5 CICP12-201ENST00000455801 843 ntBASIC15.27■□□□□ 0.04
RFWD3Q6PCD5 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.27■□□□□ 0.04
RFWD3Q6PCD5 ALG3P1-201ENST00000508806 1114 ntBASIC15.27■□□□□ 0.04
RFWD3Q6PCD5 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC15.27■□□□□ 0.04
RFWD3Q6PCD5 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
RFWD3Q6PCD5 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.27■□□□□ 0.04
RFWD3Q6PCD5 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RFWD3Q6PCD5 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.27■□□□□ 0.04
RFWD3Q6PCD5 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RFWD3Q6PCD5 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC15.27■□□□□ 0.04
RFWD3Q6PCD5 AL451050.2-201ENST00000606967 682 ntBASIC15.27■□□□□ 0.04
RFWD3Q6PCD5 AL162426.1-201ENST00000624141 743 ntBASIC15.27■□□□□ 0.04
RFWD3Q6PCD5 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
RFWD3Q6PCD5 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RFWD3Q6PCD5 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RFWD3Q6PCD5 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC15.27■□□□□ 0.03
RFWD3Q6PCD5 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RFWD3Q6PCD5 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RFWD3Q6PCD5 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RFWD3Q6PCD5 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RFWD3Q6PCD5 MTHFR-210ENST00000641407 2387 ntBASIC15.27■□□□□ 0.03
RFWD3Q6PCD5 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RFWD3Q6PCD5 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
RFWD3Q6PCD5 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
RFWD3Q6PCD5 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
RFWD3Q6PCD5 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RFWD3Q6PCD5 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.27■□□□□ 0.03
RFWD3Q6PCD5 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 MRPL37P1-201ENST00000592451 1337 ntBASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 KLF2P1-201ENST00000447438 1042 ntBASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 AC004898.1-201ENST00000451057 766 ntBASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 AC044849.1-201ENST00000519737 1188 ntBASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 AC126915.1-201ENST00000522847 1038 ntBASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 AC092135.3-201ENST00000624151 1846 ntBASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RFWD3Q6PCD5 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 AC244394.1-201ENST00000435000 1665 ntBASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 AC089987.1-201ENST00000551654 2209 ntBASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 KRT8P29-201ENST00000420409 1371 ntBASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms