Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 PEBP1P2-201ENST00000603980 558 ntBASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 NAMA-206ENST00000605377 509 ntTSL 5 BASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 MIR6746-201ENST00000620971 63 ntBASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 AC025183.3-201ENST00000623526 1482 ntBASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 RN7SL564P-201ENST00000496309 250 ntBASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 AC145285.5-201ENST00000562217 361 ntBASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 GAS7-216ENST00000583882 553 ntTSL 5 BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 AP005212.2-201ENST00000584979 510 ntBASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 AL021707.6-201ENST00000609212 491 ntBASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 AL118522.1-201ENST00000611368 560 ntBASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 HMGB1P24-201ENST00000611897 328 ntBASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LYSMD4Q5XG99 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.15
LYSMD4Q5XG99 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
LYSMD4Q5XG99 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 AL135901.1-201ENST00000451812 333 ntBASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 RN7SL494P-201ENST00000461517 304 ntBASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC14.14□□□□□ -0.15
LYSMD4Q5XG99 AL118516.1-201ENST00000564152 670 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms