Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
TPM4P67936 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.46■□□□□ 0.23
TPM4P67936 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.46■□□□□ 0.23
TPM4P67936 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.46■□□□□ 0.23
TPM4P67936 AC114812.1-204ENST00000449669 728 ntBASIC16.46■□□□□ 0.23
TPM4P67936 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.46■□□□□ 0.23
TPM4P67936 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
TPM4P67936 RARRES2P5-201ENST00000564013 466 ntBASIC16.46■□□□□ 0.23
TPM4P67936 AC007431.3-201ENST00000623221 587 ntBASIC16.46■□□□□ 0.23
TPM4P67936 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TPM4P67936 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
TPM4P67936 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TPM4P67936 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TPM4P67936 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
TPM4P67936 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TPM4P67936 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TPM4P67936 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TPM4P67936 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
TPM4P67936 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TPM4P67936 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC16.46■□□□□ 0.23
TPM4P67936 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TPM4P67936 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
TPM4P67936 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC16.46■□□□□ 0.22
TPM4P67936 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TPM4P67936 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TPM4P67936 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TPM4P67936 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TPM4P67936 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC16.46■□□□□ 0.22
TPM4P67936 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TPM4P67936 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC16.45■□□□□ 0.22
TPM4P67936 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TPM4P67936 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TPM4P67936 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TPM4P67936 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TPM4P67936 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.45■□□□□ 0.22
TPM4P67936 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
TPM4P67936 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC16.45■□□□□ 0.22
TPM4P67936 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TPM4P67936 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TPM4P67936 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC16.45■□□□□ 0.22
TPM4P67936 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TPM4P67936 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TPM4P67936 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TPM4P67936 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.45■□□□□ 0.22
TPM4P67936 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.45■□□□□ 0.22
TPM4P67936 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.45■□□□□ 0.22
TPM4P67936 BX842568.4-201ENST00000421222 227 ntBASIC16.45■□□□□ 0.22
TPM4P67936 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TPM4P67936 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TPM4P67936 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TPM4P67936 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.45■□□□□ 0.22
TPM4P67936 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.45■□□□□ 0.22
TPM4P67936 AC109322.1-201ENST00000524499 1264 ntBASIC16.45■□□□□ 0.22
TPM4P67936 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.45■□□□□ 0.22
TPM4P67936 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TPM4P67936 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.45■□□□□ 0.22
TPM4P67936 AC025678.2-201ENST00000562061 970 ntBASIC16.45■□□□□ 0.22
TPM4P67936 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TPM4P67936 AL158211.3-201ENST00000607385 239 ntBASIC16.45■□□□□ 0.22
TPM4P67936 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.45■□□□□ 0.22
TPM4P67936 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.45■□□□□ 0.22
TPM4P67936 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TPM4P67936 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TPM4P67936 FAM90A12P-201ENST00000519497 2375 ntBASIC16.45■□□□□ 0.22
TPM4P67936 FAM90A24P-201ENST00000520792 2369 ntBASIC16.45■□□□□ 0.22
TPM4P67936 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
TPM4P67936 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TPM4P67936 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TPM4P67936 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TPM4P67936 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
TPM4P67936 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TPM4P67936 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TPM4P67936 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
TPM4P67936 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TPM4P67936 TP73-203ENST00000357733 4899 ntTSL 5 BASIC16.45■□□□□ 0.22
TPM4P67936 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TPM4P67936 AC100757.3-201ENST00000622361 1406 ntBASIC16.45■□□□□ 0.22
TPM4P67936 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC16.44■□□□□ 0.22
TPM4P67936 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TPM4P67936 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TPM4P67936 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TPM4P67936 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TPM4P67936 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.44■□□□□ 0.22
TPM4P67936 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TPM4P67936 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.44■□□□□ 0.22
TPM4P67936 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TPM4P67936 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TPM4P67936 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.44■□□□□ 0.22
TPM4P67936 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TPM4P67936 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
TPM4P67936 GIMAP3P-201ENST00000495150 836 ntBASIC16.44■□□□□ 0.22
TPM4P67936 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.44■□□□□ 0.22
TPM4P67936 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.44■□□□□ 0.22
TPM4P67936 SRD5A3P1-201ENST00000603021 949 ntBASIC16.44■□□□□ 0.22
TPM4P67936 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TPM4P67936 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.44■□□□□ 0.22
TPM4P67936 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TPM4P67936 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TPM4P67936 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TPM4P67936 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms