Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 SPDYE12P-201ENST00000618416 771 ntBASIC10.39□□□□□ -0.75
RPL39P62891 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
RPL39P62891 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC10.39□□□□□ -0.75
RPL39P62891 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC10.39□□□□□ -0.75
RPL39P62891 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
RPL39P62891 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
RPL39P62891 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
RPL39P62891 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
RPL39P62891 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC10.39□□□□□ -0.75
RPL39P62891 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
RPL39P62891 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
RPL39P62891 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC10.39□□□□□ -0.75
RPL39P62891 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
RPL39P62891 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
RPL39P62891 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
RPL39P62891 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC10.39□□□□□ -0.75
RPL39P62891 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
RPL39P62891 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
RPL39P62891 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
RPL39P62891 LINC02486-201ENST00000604157 3000 ntBASIC10.39□□□□□ -0.75
RPL39P62891 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
RPL39P62891 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
RPL39P62891 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC10.38□□□□□ -0.75
RPL39P62891 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
RPL39P62891 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
RPL39P62891 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
RPL39P62891 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
RPL39P62891 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
RPL39P62891 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC10.38□□□□□ -0.75
RPL39P62891 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
RPL39P62891 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
RPL39P62891 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
RPL39P62891 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
RPL39P62891 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
RPL39P62891 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
RPL39P62891 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
RPL39P62891 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC10.38□□□□□ -0.75
RPL39P62891 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
RPL39P62891 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
RPL39P62891 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC10.38□□□□□ -0.75
RPL39P62891 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
RPL39P62891 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
RPL39P62891 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
RPL39P62891 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
RPL39P62891 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
RPL39P62891 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
RPL39P62891 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
RPL39P62891 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
RPL39P62891 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC10.38□□□□□ -0.75
RPL39P62891 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
RPL39P62891 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
RPL39P62891 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
RPL39P62891 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC10.38□□□□□ -0.75
RPL39P62891 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
RPL39P62891 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC10.38□□□□□ -0.75
RPL39P62891 AC005014.1-201ENST00000432006 2976 ntBASIC10.38□□□□□ -0.75
RPL39P62891 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC10.38□□□□□ -0.75
RPL39P62891 PPP6R2P1-201ENST00000450880 1275 ntBASIC10.38□□□□□ -0.75
RPL39P62891 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC10.38□□□□□ -0.75
RPL39P62891 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC10.38□□□□□ -0.75
RPL39P62891 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC10.38□□□□□ -0.75
RPL39P62891 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC10.38□□□□□ -0.75
RPL39P62891 AC044860.1-202ENST00000559481 777 ntBASIC10.38□□□□□ -0.75
RPL39P62891 AC005829.1-201ENST00000570002 483 ntBASIC10.38□□□□□ -0.75
RPL39P62891 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC10.38□□□□□ -0.75
RPL39P62891 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC10.38□□□□□ -0.75
RPL39P62891 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC10.38□□□□□ -0.75
RPL39P62891 AC107373.2-201ENST00000607735 490 ntBASIC10.38□□□□□ -0.75
RPL39P62891 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC10.38□□□□□ -0.75
RPL39P62891 GOLGA8IP-202ENST00000611635 2100 ntBASIC10.38□□□□□ -0.75
RPL39P62891 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC10.38□□□□□ -0.75
RPL39P62891 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC10.38□□□□□ -0.75
RPL39P62891 AP001059.3-201ENST00000619053 235 ntBASIC10.38□□□□□ -0.75
RPL39P62891 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
RPL39P62891 AL158212.4-201ENST00000624062 1286 ntBASIC10.38□□□□□ -0.75
RPL39P62891 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
RPL39P62891 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
RPL39P62891 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
RPL39P62891 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC10.38□□□□□ -0.75
RPL39P62891 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
RPL39P62891 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
RPL39P62891 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
RPL39P62891 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC10.38□□□□□ -0.75
RPL39P62891 OS9-218ENST00000551035 2246 ntTSL 2 BASIC10.38□□□□□ -0.75
RPL39P62891 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC10.38□□□□□ -0.75
RPL39P62891 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
RPL39P62891 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
RPL39P62891 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
RPL39P62891 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
RPL39P62891 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
RPL39P62891 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
RPL39P62891 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
RPL39P62891 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC10.38□□□□□ -0.75
RPL39P62891 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
RPL39P62891 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
RPL39P62891 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC10.38□□□□□ -0.75
RPL39P62891 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
RPL39P62891 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC10.38□□□□□ -0.75
RPL39P62891 HAL-202ENST00000538703 2637 ntTSL 2 BASIC10.37□□□□□ -0.75
RPL39P62891 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms