Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.83□□□□□ -0.2
RPS3AP61247 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
RPS3AP61247 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RPS3AP61247 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPS3AP61247 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.83□□□□□ -0.2
RPS3AP61247 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RPS3AP61247 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPS3AP61247 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.82□□□□□ -0.2
RPS3AP61247 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RPS3AP61247 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.82□□□□□ -0.2
RPS3AP61247 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.82□□□□□ -0.2
RPS3AP61247 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPS3AP61247 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPS3AP61247 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPS3AP61247 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
RPS3AP61247 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
RPS3AP61247 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RPS3AP61247 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.82□□□□□ -0.2
RPS3AP61247 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RPS3AP61247 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
RPS3AP61247 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.82□□□□□ -0.2
RPS3AP61247 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPS3AP61247 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPS3AP61247 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPS3AP61247 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RPS3AP61247 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
RPS3AP61247 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
RPS3AP61247 AL645937.2-201ENST00000396808 931 ntBASIC13.82□□□□□ -0.2
RPS3AP61247 BAATP1-201ENST00000412284 1225 ntBASIC13.82□□□□□ -0.2
RPS3AP61247 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPS3AP61247 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RPS3AP61247 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.82□□□□□ -0.2
RPS3AP61247 AC234783.1-201ENST00000441761 496 ntBASIC13.82□□□□□ -0.2
RPS3AP61247 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RPS3AP61247 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RPS3AP61247 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.82□□□□□ -0.2
RPS3AP61247 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.82□□□□□ -0.2
RPS3AP61247 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.82□□□□□ -0.2
RPS3AP61247 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.82□□□□□ -0.2
RPS3AP61247 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.82□□□□□ -0.2
RPS3AP61247 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.82□□□□□ -0.2
RPS3AP61247 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.82□□□□□ -0.2
RPS3AP61247 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.82□□□□□ -0.2
RPS3AP61247 BTNL10-201ENST00000595971 695 ntBASIC13.82□□□□□ -0.2
RPS3AP61247 AC008735.3-201ENST00000596646 500 ntBASIC13.82□□□□□ -0.2
RPS3AP61247 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.82□□□□□ -0.2
RPS3AP61247 AP005019.2-201ENST00000615104 511 ntBASIC13.82□□□□□ -0.2
RPS3AP61247 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
RPS3AP61247 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RPS3AP61247 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPS3AP61247 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.82□□□□□ -0.2
RPS3AP61247 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.82□□□□□ -0.2
RPS3AP61247 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
RPS3AP61247 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
RPS3AP61247 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPS3AP61247 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
RPS3AP61247 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPS3AP61247 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPS3AP61247 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
RPS3AP61247 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
RPS3AP61247 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.82□□□□□ -0.2
RPS3AP61247 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.82□□□□□ -0.2
RPS3AP61247 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
RPS3AP61247 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.82□□□□□ -0.2
RPS3AP61247 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.82□□□□□ -0.2
RPS3AP61247 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.82□□□□□ -0.2
RPS3AP61247 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPS3AP61247 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.81□□□□□ -0.2
RPS3AP61247 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPS3AP61247 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPS3AP61247 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RPS3AP61247 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.81□□□□□ -0.2
RPS3AP61247 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPS3AP61247 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
RPS3AP61247 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPS3AP61247 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.81□□□□□ -0.2
RPS3AP61247 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.81□□□□□ -0.2
RPS3AP61247 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPS3AP61247 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPS3AP61247 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
RPS3AP61247 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPS3AP61247 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.81□□□□□ -0.2
RPS3AP61247 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPS3AP61247 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPS3AP61247 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC13.81□□□□□ -0.2
RPS3AP61247 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPS3AP61247 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
RPS3AP61247 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
RPS3AP61247 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPS3AP61247 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RPS3AP61247 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.81□□□□□ -0.2
RPS3AP61247 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RPS3AP61247 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
RPS3AP61247 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPS3AP61247 GK-202ENST00000378941 458 ntTSL 3 BASIC13.81□□□□□ -0.2
RPS3AP61247 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.81□□□□□ -0.2
RPS3AP61247 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPS3AP61247 BOLA2P3-201ENST00000404566 256 ntBASIC13.81□□□□□ -0.2
RPS3AP61247 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.81□□□□□ -0.2
RPS3AP61247 AC093433.1-201ENST00000458048 571 ntBASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms