Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.46□□□□□ -0.25
CLDN20P56880 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN20P56880 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN20P56880 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.46□□□□□ -0.25
CLDN20P56880 AL138725.1-201ENST00000407347 1314 ntBASIC13.46□□□□□ -0.25
CLDN20P56880 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.46□□□□□ -0.25
CLDN20P56880 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN20P56880 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN20P56880 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.46□□□□□ -0.25
CLDN20P56880 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.46□□□□□ -0.25
CLDN20P56880 SALL4P5-201ENST00000419001 1760 ntBASIC13.46□□□□□ -0.25
CLDN20P56880 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.46□□□□□ -0.25
CLDN20P56880 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN20P56880 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN20P56880 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN20P56880 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN20P56880 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN20P56880 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.46□□□□□ -0.25
CLDN20P56880 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.46□□□□□ -0.25
CLDN20P56880 AC007969.1-201ENST00000433675 447 ntBASIC13.46□□□□□ -0.25
CLDN20P56880 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CLDN20P56880 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CLDN20P56880 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.46□□□□□ -0.25
CLDN20P56880 RN7SL560P-201ENST00000577943 264 ntBASIC13.46□□□□□ -0.25
CLDN20P56880 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN20P56880 AC003102.2-201ENST00000589195 1469 ntBASIC13.46□□□□□ -0.25
CLDN20P56880 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN20P56880 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CLDN20P56880 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN20P56880 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN20P56880 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CLDN20P56880 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
CLDN20P56880 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CLDN20P56880 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.46□□□□□ -0.26
CLDN20P56880 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.46□□□□□ -0.26
CLDN20P56880 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
CLDN20P56880 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.46□□□□□ -0.26
CLDN20P56880 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
CLDN20P56880 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CLDN20P56880 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
CLDN20P56880 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
CLDN20P56880 AP000593.2-201ENST00000542775 1433 ntBASIC13.46□□□□□ -0.26
CLDN20P56880 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CLDN20P56880 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CLDN20P56880 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CLDN20P56880 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CLDN20P56880 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CLDN20P56880 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
CLDN20P56880 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.46□□□□□ -0.26
CLDN20P56880 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
CLDN20P56880 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.45□□□□□ -0.26
CLDN20P56880 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN20P56880 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN20P56880 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN20P56880 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN20P56880 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN20P56880 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN20P56880 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN20P56880 TUBB1P2-201ENST00000422712 1306 ntBASIC13.45□□□□□ -0.26
CLDN20P56880 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.45□□□□□ -0.26
CLDN20P56880 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.45□□□□□ -0.26
CLDN20P56880 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN20P56880 TUBB1P1-201ENST00000503144 1300 ntBASIC13.45□□□□□ -0.26
CLDN20P56880 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.45□□□□□ -0.26
CLDN20P56880 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.45□□□□□ -0.26
CLDN20P56880 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN20P56880 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN20P56880 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.45□□□□□ -0.26
CLDN20P56880 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
CLDN20P56880 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CLDN20P56880 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CLDN20P56880 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN20P56880 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN20P56880 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
CLDN20P56880 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN20P56880 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN20P56880 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN20P56880 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.45□□□□□ -0.26
CLDN20P56880 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN20P56880 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN20P56880 RN7SKP175-201ENST00000408472 289 ntBASIC13.45□□□□□ -0.26
CLDN20P56880 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN20P56880 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.45□□□□□ -0.26
CLDN20P56880 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.45□□□□□ -0.26
CLDN20P56880 AL355994.2-201ENST00000447882 704 ntBASIC13.45□□□□□ -0.26
CLDN20P56880 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.45□□□□□ -0.26
CLDN20P56880 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.45□□□□□ -0.26
CLDN20P56880 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.45□□□□□ -0.26
CLDN20P56880 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
CLDN20P56880 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.45□□□□□ -0.26
CLDN20P56880 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.45□□□□□ -0.26
CLDN20P56880 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.45□□□□□ -0.26
CLDN20P56880 MIR4683-201ENST00000579659 81 ntBASIC13.45□□□□□ -0.26
CLDN20P56880 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.45□□□□□ -0.26
CLDN20P56880 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.45□□□□□ -0.26
CLDN20P56880 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.45□□□□□ -0.26
CLDN20P56880 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.45□□□□□ -0.26
CLDN20P56880 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLDN20P56880 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.45□□□□□ -0.26
CLDN20P56880 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms