Protein–RNA interactions for Protein: P50548

ERF, ETS domain-containing transcription factor ERF, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERFP50548 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.18□□□□□ -0.14
ERFP50548 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC14.18□□□□□ -0.14
ERFP50548 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ERFP50548 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ERFP50548 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ERFP50548 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ERFP50548 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ERFP50548 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
ERFP50548 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
ERFP50548 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC14.18□□□□□ -0.14
ERFP50548 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC14.18□□□□□ -0.14
ERFP50548 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ERFP50548 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.18□□□□□ -0.14
ERFP50548 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ERFP50548 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ERFP50548 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
ERFP50548 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC14.18□□□□□ -0.14
ERFP50548 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ERFP50548 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.18□□□□□ -0.14
ERFP50548 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ERFP50548 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.18□□□□□ -0.14
ERFP50548 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ERFP50548 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.18□□□□□ -0.14
ERFP50548 BX842568.4-201ENST00000421222 227 ntBASIC14.18□□□□□ -0.14
ERFP50548 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.18□□□□□ -0.14
ERFP50548 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.18□□□□□ -0.14
ERFP50548 AC069335.1-201ENST00000489972 472 ntBASIC14.18□□□□□ -0.14
ERFP50548 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.18□□□□□ -0.14
ERFP50548 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.18□□□□□ -0.14
ERFP50548 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.18□□□□□ -0.14
ERFP50548 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
ERFP50548 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.18□□□□□ -0.14
ERFP50548 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ERFP50548 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.18□□□□□ -0.14
ERFP50548 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.18□□□□□ -0.14
ERFP50548 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ERFP50548 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.18□□□□□ -0.14
ERFP50548 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ERFP50548 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.18□□□□□ -0.14
ERFP50548 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ERFP50548 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ERFP50548 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ERFP50548 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ERFP50548 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ERFP50548 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ERFP50548 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
ERFP50548 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ERFP50548 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ERFP50548 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ERFP50548 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC14.17□□□□□ -0.14
ERFP50548 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
ERFP50548 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
ERFP50548 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ERFP50548 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ERFP50548 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ERFP50548 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC14.17□□□□□ -0.14
ERFP50548 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
ERFP50548 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.17□□□□□ -0.14
ERFP50548 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ERFP50548 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
ERFP50548 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
ERFP50548 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ERFP50548 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC14.17□□□□□ -0.14
ERFP50548 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ERFP50548 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
ERFP50548 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ERFP50548 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.17□□□□□ -0.14
ERFP50548 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ERFP50548 SPDYE17-201ENST00000412399 783 ntBASIC14.17□□□□□ -0.14
ERFP50548 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.17□□□□□ -0.14
ERFP50548 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.17□□□□□ -0.14
ERFP50548 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.17□□□□□ -0.14
ERFP50548 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.17□□□□□ -0.14
ERFP50548 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ERFP50548 AC092865.5-201ENST00000545435 363 ntBASIC14.17□□□□□ -0.14
ERFP50548 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.17□□□□□ -0.14
ERFP50548 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
ERFP50548 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.17□□□□□ -0.14
ERFP50548 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.17□□□□□ -0.14
ERFP50548 AC003101.2-201ENST00000612557 442 ntBASIC14.17□□□□□ -0.14
ERFP50548 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.17□□□□□ -0.14
ERFP50548 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.17□□□□□ -0.14
ERFP50548 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.17□□□□□ -0.14
ERFP50548 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ERFP50548 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ERFP50548 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
ERFP50548 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ERFP50548 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
ERFP50548 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC14.17□□□□□ -0.14
ERFP50548 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ERFP50548 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
ERFP50548 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC14.17□□□□□ -0.14
ERFP50548 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
ERFP50548 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ERFP50548 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
ERFP50548 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
ERFP50548 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
ERFP50548 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
ERFP50548 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ERFP50548 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms