Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.05□□□□□ -0.32
CSNK1A1P48729 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.05□□□□□ -0.32
CSNK1A1P48729 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.05□□□□□ -0.32
CSNK1A1P48729 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.05□□□□□ -0.32
CSNK1A1P48729 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.05□□□□□ -0.32
CSNK1A1P48729 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.05□□□□□ -0.32
CSNK1A1P48729 HILS1-202ENST00000545329 423 ntBASIC13.05□□□□□ -0.32
CSNK1A1P48729 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.05□□□□□ -0.32
CSNK1A1P48729 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.05□□□□□ -0.32
CSNK1A1P48729 AC133552.6-201ENST00000613406 534 ntBASIC13.05□□□□□ -0.32
CSNK1A1P48729 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.05□□□□□ -0.32
CSNK1A1P48729 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
CSNK1A1P48729 AC027601.3-201ENST00000622907 509 ntBASIC13.05□□□□□ -0.32
CSNK1A1P48729 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.05□□□□□ -0.32
CSNK1A1P48729 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.05□□□□□ -0.32
CSNK1A1P48729 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CSNK1A1P48729 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CSNK1A1P48729 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CSNK1A1P48729 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CSNK1A1P48729 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CSNK1A1P48729 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CSNK1A1P48729 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.05□□□□□ -0.32
CSNK1A1P48729 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CSNK1A1P48729 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.05□□□□□ -0.32
CSNK1A1P48729 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CSNK1A1P48729 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CSNK1A1P48729 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSNK1A1P48729 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSNK1A1P48729 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSNK1A1P48729 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.04□□□□□ -0.32
CSNK1A1P48729 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CSNK1A1P48729 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSNK1A1P48729 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CSNK1A1P48729 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSNK1A1P48729 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSNK1A1P48729 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSNK1A1P48729 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CSNK1A1P48729 AC087386.2-201ENST00000623212 4637 ntBASIC13.04□□□□□ -0.32
CSNK1A1P48729 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSNK1A1P48729 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSNK1A1P48729 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CSNK1A1P48729 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.04□□□□□ -0.32
CSNK1A1P48729 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSNK1A1P48729 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSNK1A1P48729 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.04□□□□□ -0.32
CSNK1A1P48729 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSNK1A1P48729 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSNK1A1P48729 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSNK1A1P48729 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
CSNK1A1P48729 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CSNK1A1P48729 ANKRD19P-201ENST00000338192 862 ntBASIC13.04□□□□□ -0.32
CSNK1A1P48729 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSNK1A1P48729 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSNK1A1P48729 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSNK1A1P48729 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.04□□□□□ -0.32
CSNK1A1P48729 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.04□□□□□ -0.32
CSNK1A1P48729 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
CSNK1A1P48729 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.04□□□□□ -0.32
CSNK1A1P48729 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.04□□□□□ -0.32
CSNK1A1P48729 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.04□□□□□ -0.32
CSNK1A1P48729 CHMP1AP1-201ENST00000445563 662 ntBASIC13.04□□□□□ -0.32
CSNK1A1P48729 HIST2H2BB-201ENST00000449108 381 ntBASIC13.04□□□□□ -0.32
CSNK1A1P48729 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CSNK1A1P48729 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CSNK1A1P48729 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.04□□□□□ -0.32
CSNK1A1P48729 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.04□□□□□ -0.32
CSNK1A1P48729 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.04□□□□□ -0.32
CSNK1A1P48729 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.04□□□□□ -0.32
CSNK1A1P48729 SNX29P1-201ENST00000548357 1007 ntBASIC13.04□□□□□ -0.32
CSNK1A1P48729 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.04□□□□□ -0.32
CSNK1A1P48729 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.04□□□□□ -0.32
CSNK1A1P48729 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.04□□□□□ -0.32
CSNK1A1P48729 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSNK1A1P48729 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.04□□□□□ -0.32
CSNK1A1P48729 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSNK1A1P48729 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CSNK1A1P48729 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSNK1A1P48729 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSNK1A1P48729 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSNK1A1P48729 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
CSNK1A1P48729 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSNK1A1P48729 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSNK1A1P48729 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSNK1A1P48729 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.04□□□□□ -0.32
CSNK1A1P48729 RN7SL832P-201ENST00000607781 1756 ntBASIC13.04□□□□□ -0.32
CSNK1A1P48729 AC090505.1-201ENST00000430515 1834 ntBASIC13.04□□□□□ -0.32
CSNK1A1P48729 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CSNK1A1P48729 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSNK1A1P48729 AC009093.10-201ENST00000641956 1442 ntBASIC13.04□□□□□ -0.32
CSNK1A1P48729 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.04□□□□□ -0.32
CSNK1A1P48729 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSNK1A1P48729 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CSNK1A1P48729 AC117489.1-201ENST00000625169 3217 ntBASIC13.03□□□□□ -0.32
CSNK1A1P48729 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CSNK1A1P48729 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.03□□□□□ -0.32
CSNK1A1P48729 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CSNK1A1P48729 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.03□□□□□ -0.32
CSNK1A1P48729 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CSNK1A1P48729 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CSNK1A1P48729 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms