Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
KDM5CP41229 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KDM5CP41229 AC011270.2-201ENST00000624293 2550 ntBASIC21.2■□□□□ 0.98
KDM5CP41229 MARS-233ENST00000628866 2583 ntTSL 5 BASIC21.2■□□□□ 0.98
KDM5CP41229 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
KDM5CP41229 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
KDM5CP41229 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
KDM5CP41229 OR2W2P-201ENST00000406313 909 ntBASIC21.19■□□□□ 0.98
KDM5CP41229 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KDM5CP41229 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
KDM5CP41229 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC21.19■□□□□ 0.98
KDM5CP41229 AC139713.2-207ENST00000641556 1292 ntBASIC21.19■□□□□ 0.98
KDM5CP41229 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
KDM5CP41229 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
KDM5CP41229 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
KDM5CP41229 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC21.19■□□□□ 0.98
KDM5CP41229 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KDM5CP41229 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC21.19■□□□□ 0.98
KDM5CP41229 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KDM5CP41229 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC21.19■□□□□ 0.98
KDM5CP41229 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KDM5CP41229 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
KDM5CP41229 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
KDM5CP41229 MYADML-201ENST00000474610 2147 ntBASIC21.19■□□□□ 0.98
KDM5CP41229 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KDM5CP41229 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
KDM5CP41229 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KDM5CP41229 SSR4-202ENST00000370085 526 ntTSL 2 BASIC21.19■□□□□ 0.98
KDM5CP41229 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
KDM5CP41229 HNRNPA3P6-201ENST00000472163 1006 ntBASIC21.19■□□□□ 0.98
KDM5CP41229 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC21.19■□□□□ 0.98
KDM5CP41229 BCL2L12P1-201ENST00000508390 733 ntBASIC21.19■□□□□ 0.98
KDM5CP41229 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC21.19■□□□□ 0.98
KDM5CP41229 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC21.19■□□□□ 0.98
KDM5CP41229 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
KDM5CP41229 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC21.19■□□□□ 0.98
KDM5CP41229 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC21.19■□□□□ 0.98
KDM5CP41229 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC21.19■□□□□ 0.98
KDM5CP41229 BX322534.1-201ENST00000635574 241 ntBASIC21.19■□□□□ 0.98
KDM5CP41229 AC215524.1-201ENST00000635696 241 ntBASIC21.19■□□□□ 0.98
KDM5CP41229 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
KDM5CP41229 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
KDM5CP41229 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KDM5CP41229 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KDM5CP41229 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KDM5CP41229 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KDM5CP41229 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
KDM5CP41229 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KDM5CP41229 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC21.18■□□□□ 0.98
KDM5CP41229 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC21.18■□□□□ 0.98
KDM5CP41229 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
KDM5CP41229 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KDM5CP41229 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KDM5CP41229 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KDM5CP41229 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
KDM5CP41229 ACTBP14-201ENST00000411655 1089 ntBASIC21.18■□□□□ 0.98
KDM5CP41229 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KDM5CP41229 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC21.18■□□□□ 0.98
KDM5CP41229 AL049840.2-201ENST00000602722 535 ntBASIC21.18■□□□□ 0.98
KDM5CP41229 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
KDM5CP41229 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC21.18■□□□□ 0.98
KDM5CP41229 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC21.18■□□□□ 0.98
KDM5CP41229 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KDM5CP41229 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC21.18■□□□□ 0.98
KDM5CP41229 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC21.17■□□□□ 0.98
KDM5CP41229 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
KDM5CP41229 TBC1D27-202ENST00000424239 1573 ntBASIC21.17■□□□□ 0.98
KDM5CP41229 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KDM5CP41229 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
KDM5CP41229 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KDM5CP41229 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
KDM5CP41229 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KDM5CP41229 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
KDM5CP41229 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC21.17■□□□□ 0.98
KDM5CP41229 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
KDM5CP41229 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC21.17■□□□□ 0.98
KDM5CP41229 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KDM5CP41229 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
KDM5CP41229 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
KDM5CP41229 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC21.17■□□□□ 0.98
KDM5CP41229 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
KDM5CP41229 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
KDM5CP41229 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
KDM5CP41229 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
KDM5CP41229 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC21.17■□□□□ 0.98
KDM5CP41229 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC21.17■□□□□ 0.98
KDM5CP41229 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC21.17■□□□□ 0.98
KDM5CP41229 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC21.17■□□□□ 0.98
KDM5CP41229 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
KDM5CP41229 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KDM5CP41229 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KDM5CP41229 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KDM5CP41229 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
KDM5CP41229 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC21.17■□□□□ 0.98
KDM5CP41229 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KDM5CP41229 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KDM5CP41229 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
KDM5CP41229 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KDM5CP41229 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
KDM5CP41229 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms