Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL6A2P12110 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
COL6A2P12110 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL6A2P12110 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL6A2P12110 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
COL6A2P12110 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL6A2P12110 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC14.47□□□□□ -0.09
COL6A2P12110 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL6A2P12110 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL6A2P12110 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.47□□□□□ -0.09
COL6A2P12110 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.47□□□□□ -0.09
COL6A2P12110 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
COL6A2P12110 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.47□□□□□ -0.09
COL6A2P12110 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL6A2P12110 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
COL6A2P12110 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
COL6A2P12110 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
COL6A2P12110 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL6A2P12110 AC073548.1-201ENST00000624088 1882 ntBASIC14.47□□□□□ -0.09
COL6A2P12110 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.47□□□□□ -0.09
COL6A2P12110 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL6A2P12110 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL6A2P12110 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
COL6A2P12110 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.47□□□□□ -0.09
COL6A2P12110 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
COL6A2P12110 CYMP-203ENST00000474680 1263 ntBASIC14.47□□□□□ -0.09
COL6A2P12110 PTP4A1P2-201ENST00000546033 454 ntBASIC14.47□□□□□ -0.09
COL6A2P12110 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
COL6A2P12110 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.47□□□□□ -0.09
COL6A2P12110 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.47□□□□□ -0.09
COL6A2P12110 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL6A2P12110 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.47□□□□□ -0.09
COL6A2P12110 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL6A2P12110 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.47□□□□□ -0.09
COL6A2P12110 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
COL6A2P12110 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.47□□□□□ -0.09
COL6A2P12110 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL6A2P12110 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
COL6A2P12110 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
COL6A2P12110 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL6A2P12110 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC14.47□□□□□ -0.09
COL6A2P12110 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL6A2P12110 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
COL6A2P12110 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.47□□□□□ -0.09
COL6A2P12110 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
COL6A2P12110 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
COL6A2P12110 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
COL6A2P12110 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.46□□□□□ -0.09
COL6A2P12110 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
COL6A2P12110 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.46□□□□□ -0.09
COL6A2P12110 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
COL6A2P12110 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.46□□□□□ -0.09
COL6A2P12110 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.46□□□□□ -0.09
COL6A2P12110 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
COL6A2P12110 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
COL6A2P12110 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.46□□□□□ -0.09
COL6A2P12110 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.46□□□□□ -0.09
COL6A2P12110 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
COL6A2P12110 TPM3P8-201ENST00000330554 643 ntBASIC14.46□□□□□ -0.09
COL6A2P12110 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
COL6A2P12110 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
COL6A2P12110 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
COL6A2P12110 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.46□□□□□ -0.09
COL6A2P12110 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.46□□□□□ -0.09
COL6A2P12110 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.46□□□□□ -0.09
COL6A2P12110 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.46□□□□□ -0.09
COL6A2P12110 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.46□□□□□ -0.09
COL6A2P12110 AL035414.1-201ENST00000451327 857 ntBASIC14.46□□□□□ -0.09
COL6A2P12110 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
COL6A2P12110 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.46□□□□□ -0.09
COL6A2P12110 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
COL6A2P12110 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
COL6A2P12110 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
COL6A2P12110 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.46□□□□□ -0.09
COL6A2P12110 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
COL6A2P12110 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
COL6A2P12110 AC106820.3-201ENST00000561653 397 ntBASIC14.46□□□□□ -0.09
COL6A2P12110 AC140912.1-201ENST00000577171 1054 ntBASIC14.46□□□□□ -0.09
COL6A2P12110 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.46□□□□□ -0.09
COL6A2P12110 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.46□□□□□ -0.09
COL6A2P12110 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.46□□□□□ -0.09
COL6A2P12110 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
COL6A2P12110 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
COL6A2P12110 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
COL6A2P12110 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
COL6A2P12110 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
COL6A2P12110 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.46□□□□□ -0.1
COL6A2P12110 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
COL6A2P12110 AC105206.1-202ENST00000314927 2368 ntBASIC14.46□□□□□ -0.1
COL6A2P12110 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.46□□□□□ -0.1
COL6A2P12110 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
COL6A2P12110 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
COL6A2P12110 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.46□□□□□ -0.1
COL6A2P12110 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.1
COL6A2P12110 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
COL6A2P12110 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
COL6A2P12110 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.46□□□□□ -0.1
COL6A2P12110 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL6A2P12110 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL6A2P12110 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms