Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBL4AP11441 AP000593.2-201ENST00000542775 1433 ntBASIC13.63□□□□□ -0.23
UBL4AP11441 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBL4AP11441 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
UBL4AP11441 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBL4AP11441 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBL4AP11441 AC097359.2-201ENST00000604992 2389 ntBASIC13.63□□□□□ -0.23
UBL4AP11441 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC13.62□□□□□ -0.23
UBL4AP11441 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBL4AP11441 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.62□□□□□ -0.23
UBL4AP11441 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.62□□□□□ -0.23
UBL4AP11441 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.62□□□□□ -0.23
UBL4AP11441 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBL4AP11441 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
UBL4AP11441 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.62□□□□□ -0.23
UBL4AP11441 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBL4AP11441 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
UBL4AP11441 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
UBL4AP11441 TRIM80P-201ENST00000455685 2848 ntBASIC13.62□□□□□ -0.23
UBL4AP11441 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBL4AP11441 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
UBL4AP11441 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBL4AP11441 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.62□□□□□ -0.23
UBL4AP11441 INE2-201ENST00000630399 1874 ntBASIC13.62□□□□□ -0.23
UBL4AP11441 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBL4AP11441 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBL4AP11441 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBL4AP11441 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.62□□□□□ -0.23
UBL4AP11441 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBL4AP11441 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBL4AP11441 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBL4AP11441 CD8B2-202ENST00000417670 633 ntBASIC13.62□□□□□ -0.23
UBL4AP11441 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBL4AP11441 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBL4AP11441 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBL4AP11441 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.62□□□□□ -0.23
UBL4AP11441 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBL4AP11441 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.62□□□□□ -0.23
UBL4AP11441 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.62□□□□□ -0.23
UBL4AP11441 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.62□□□□□ -0.23
UBL4AP11441 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBL4AP11441 OR10B1P-201ENST00000601666 907 ntBASIC13.62□□□□□ -0.23
UBL4AP11441 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBL4AP11441 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBL4AP11441 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBL4AP11441 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBL4AP11441 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBL4AP11441 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.62□□□□□ -0.23
UBL4AP11441 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBL4AP11441 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBL4AP11441 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
UBL4AP11441 AC015802.1-201ENST00000588104 1449 ntBASIC13.62□□□□□ -0.23
UBL4AP11441 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBL4AP11441 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
UBL4AP11441 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
UBL4AP11441 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBL4AP11441 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC13.62□□□□□ -0.23
UBL4AP11441 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBL4AP11441 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
UBL4AP11441 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
UBL4AP11441 AP001972.5-201ENST00000624624 2338 ntBASIC13.62□□□□□ -0.23
UBL4AP11441 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC13.62□□□□□ -0.23
UBL4AP11441 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.62□□□□□ -0.23
UBL4AP11441 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBL4AP11441 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.62□□□□□ -0.23
UBL4AP11441 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.62□□□□□ -0.23
UBL4AP11441 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBL4AP11441 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBL4AP11441 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBL4AP11441 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBL4AP11441 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBL4AP11441 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBL4AP11441 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBL4AP11441 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBL4AP11441 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBL4AP11441 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBL4AP11441 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBL4AP11441 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
UBL4AP11441 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBL4AP11441 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBL4AP11441 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBL4AP11441 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC13.61□□□□□ -0.23
UBL4AP11441 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBL4AP11441 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBL4AP11441 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.61□□□□□ -0.23
UBL4AP11441 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBL4AP11441 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.61□□□□□ -0.23
UBL4AP11441 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBL4AP11441 RN7SKP175-201ENST00000408472 289 ntBASIC13.61□□□□□ -0.23
UBL4AP11441 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBL4AP11441 CNN2P8-201ENST00000421872 913 ntBASIC13.61□□□□□ -0.23
UBL4AP11441 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.61□□□□□ -0.23
UBL4AP11441 GAPDHP21-201ENST00000450301 1010 ntBASIC13.61□□□□□ -0.23
UBL4AP11441 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
UBL4AP11441 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBL4AP11441 AC078819.1-201ENST00000547454 765 ntBASIC13.61□□□□□ -0.23
UBL4AP11441 AC012085.1-201ENST00000548270 765 ntBASIC13.61□□□□□ -0.23
UBL4AP11441 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.61□□□□□ -0.23
UBL4AP11441 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
UBL4AP11441 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms